Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq75 98.7 9e-16
seq103 86.0 5e-12
>seq75
Length=1151455
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132
||||||||||| || |||||||| || || || |||||||| | ||| || || | ||
Sbjct 638726 AACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCATCT 638785
Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTC 39191
|| ||||| || || ||||| || ||||||||||| || ||||| | || || || ||
Sbjct 638786 TCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCT-TCCTTATC 638844
Query 39192 CATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACT 39251
|||||| ||| | | | | || ||| ||| || || | |||||| |
Sbjct 638845 TTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGATAGT 638904
Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
||| || ||||| ||||| || ||||| |||||
Sbjct 638905 TTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937
>seq103
Length=249856
Score = 86.0 bits (94), Expect = 5e-12
Identities = 127/180 (71%), Gaps = 0/180 (0%)
Strand=Plus/Plus
Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156
|| || || ||||||||| ||| || || |||| |||||||| ||||| || || ||
Sbjct 43199 TTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 43258
Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCC 39216
| ||||||||||||| || | || ||| |||||| |||||| |||| | |
Sbjct 43259 AATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGTCG 43318
Query 39217 ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAG 39276
| || ||||| ||||| || || | ||||| | || ||||| || || || || |||
Sbjct 43319 ATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAG 43378
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429545034610604
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |