Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq75 98.7 9e-16 seq103 86.0 5e-12 >seq75 Length=1151455 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 39073 AACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCA 39132 ||||||||||| || |||||||| || || || |||||||| | ||| || || | || Sbjct 638726 AACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCATCT 638785 Query 39133 TCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTC-GGTGGGCACGCTCTCTTTGTC 39191 || ||||| || || ||||| || ||||||||||| || ||||| | || || || || Sbjct 638786 TCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCT-TCCTTATC 638844 Query 39192 CATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACT 39251 |||||| ||| | | | | || ||| ||| || || | |||||| | Sbjct 638845 TTGGATTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGATAGT 638904 Query 39252 TTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 ||| || ||||| ||||| || ||||| ||||| Sbjct 638905 TTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 >seq103 Length=249856 Score = 86.0 bits (94), Expect = 5e-12 Identities = 127/180 (71%), Gaps = 0/180 (0%) Strand=Plus/Plus Query 39097 TTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATA 39156 || || || ||||||||| ||| || || |||| |||||||| ||||| || || || Sbjct 43199 TTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATC 43258 Query 39157 AGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCC 39216 | ||||||||||||| || | || ||| |||||| |||||| |||| | | Sbjct 43259 AATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGTCG 43318 Query 39217 ACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAG 39276 | || ||||| ||||| || || | ||||| | || ||||| || || || || ||| Sbjct 43319 ATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGACGAAG 43378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429545034610604