Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq75 152 1e-31 seq100 131 4e-25 seq94 131 4e-25 seq103 89.7 1e-12 >seq75 Length=1151455 Score = 152 bits (168), Expect = 1e-31 Identities = 170/225 (76%), Gaps = 4/225 (2%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||||||||| |||||||||||||||| |||||| || | | || Sbjct 638944 ACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGT 639003 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || || || || ||||| || || |||||||| |||||||| ||||| || || ||||| Sbjct 639004 TCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACC 639063 Query 225612 TTCCTTGTCTTGGATCTTTTGC--TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCT 225669 ||| || ||||| | |||||| || || || ||||| |||||| |||| || || Sbjct 639064 TTCTTTATCTTGAA--TTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCA 639121 Query 225670 AACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATT 225714 | || ||||| ||||| |||| || || | ||| | |||||| Sbjct 639122 AGAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 152 bits (168), Expect = 1e-31 Identities = 152/197 (77%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| ||||| |||||||||||||||| || ||||||| ||| || | |||||| Sbjct 639182 AGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATCT 639241 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| | ||||| ||||| || || || ||||| || || Sbjct 639242 TCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTATCC 639301 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || ||| || |||||||| || || | |||||| || || || || ||| Sbjct 639302 TGGATTTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAGTC 639361 Query 225682 TTGCCCGTCAAAGTTTT 225698 ||||| || | ||||| Sbjct 639362 TTGCCAGTGAGGGTTTT 639378 Score = 113 bits (124), Expect = 1e-19 Identities = 157/218 (72%), Gaps = 4/218 (2%) Strand=Plus/Plus Query 225498 TCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCC 225557 ||||| || | ||||||||| || || || | || ||||| | | || | || Sbjct 638722 TCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCC 638781 Query 225558 ATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTT 225617 ||||||||||||||| ||||| ||||| || || || || || || ||||| |||||||| Sbjct 638782 ATCTTCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTT 638841 Query 225618 GTCTTGGATCTTTTGC--TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||||| |||||| || || || || ||||| ||| | || || || | ||| Sbjct 638842 ATCTTGGA--TTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTG 638899 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || ||||| |||| |||||| | ||| | ||||| Sbjct 638900 ATAGTTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 Score = 109 bits (120), Expect = 1e-18 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || | ||| || || || || || |||| ||||| || | || || | || ||| Sbjct 639497 AGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGACAGGGTACGGCCGTCT 639556 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| |||||||||||||| ||||| ||||| || || |||||||||||||| Sbjct 639557 TCCAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAGGGATACCTTCCTTGTCC 639616 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| || ||| || || ||||| || || | || ||||| | ||||| ||| Sbjct 639617 TGGATTTTGGACTTGACTGCGTCGATAGTATCACCTGACTCAACGTCGAGAGTGATGGTC 639676 Query 225682 TTGCCCGT 225689 || || || Sbjct 639677 TTTCCGGT 639684 >seq100 Length=64320 Score = 131 bits (144), Expect = 4e-25 Identities = 196/276 (71%), Gaps = 7/276 (3%) Strand=Plus/Plus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 || ||||||||||||||||| | ||||| ||| | |||||||| |||||| | || Sbjct 2042 AATGTTATATTTAATATTTGCTTTATTTTCAGGTTTGATAGGTACAGCTTTTTCTGTTAT 2101 Query 7500 TATAAGGTTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTT 7557 ||| | ||||||||| ||| || |||||| | || || | ||| ||| || Sbjct 2102 AATACGTTTAGAATTATCTGGACCTGGGGTTC---AGTACATAGCAG--ATAACCAGCTA 2156 Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 || || | |||| || || ||||| | | |||||||| || | |||||||| | | Sbjct 2157 TATAATAGTGTTATAACAGCCCATGCTATATTAATGATTTTTTTCATGGTTATGCCTGCT 2216 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 | ||||| ||||| || |||| || | ||| | | || || | |||||||||||| Sbjct 2217 TTAATAGGAGGTTTTGGTAATTTTTTATTACCTATTTTAATAGGAGGTCCTGATATGGCA 2276 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 ||||| || | || ||||||||||||||| || || Sbjct 2277 TTTCCTAGATTAAATAATATAAGTTTTTGACTATTA 2312 Score = 131 bits (144), Expect = 4e-25 Identities = 196/276 (71%), Gaps = 7/276 (3%) Strand=Plus/Plus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 || ||||||||||||||||| | ||||| ||| | |||||||| |||||| | || Sbjct 33471 AATGTTATATTTAATATTTGCTTTATTTTCAGGTTTGATAGGTACAGCTTTTTCTGTTAT 33530 Query 7500 TATAAGGTTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTT 7557 ||| | ||||||||| ||| || |||||| | || || | ||| ||| || Sbjct 33531 AATACGTTTAGAATTATCTGGACCTGGGGTTC---AGTACATAGCAG--ATAACCAGCTA 33585 Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 || || | |||| || || ||||| | | |||||||| || | |||||||| | | Sbjct 33586 TATAATAGTGTTATAACAGCCCATGCTATATTAATGATTTTTTTCATGGTTATGCCTGCT 33645 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 | ||||| ||||| || |||| || | ||| | | || || | |||||||||||| Sbjct 33646 TTAATAGGAGGTTTTGGTAATTTTTTATTACCTATTTTAATAGGAGGTCCTGATATGGCA 33705 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 ||||| || | || ||||||||||||||| || || Sbjct 33706 TTTCCTAGATTAAATAATATAAGTTTTTGACTATTA 33741 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| |||||||| |||||||| | ||||||||| | |||||||| ||||| || | Sbjct 3927 TTCAGGGTGACCAAAGAATCAGAAAAGATGTTGATATAATATAGGATCACCTCCTCCAGC 3868 Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | ||||| |||| | ||||||||||||||||| ||||| || Sbjct 3867 TAATTCAAAGAAAGAT-GTATTAAAATTTCTATCTGTTAATAC 3826 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| |||||||| |||||||| | ||||||||| | |||||||| ||||| || | Sbjct 35356 TTCAGGGTGACCAAAGAATCAGAAAAGATGTTGATATAATATAGGATCACCTCCTCCAGC 35297 Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | ||||| |||| | ||||||||||||||||| ||||| || Sbjct 35296 TAATTCAAAGAAAGAT-GTATTAAAATTTCTATCTGTTAATAC 35255 >seq94 Length=23662 Score = 131 bits (144), Expect = 4e-25 Identities = 196/276 (71%), Gaps = 7/276 (3%) Strand=Plus/Minus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 || ||||||||||||||||| | ||||| ||| | |||||||| |||||| | || Sbjct 15846 AATGTTATATTTAATATTTGCTTTATTTTCAGGTTTGATAGGTACAGCTTTTTCTGTTAT 15787 Query 7500 TATAAGGTTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTT 7557 ||| | ||||||||| ||| || |||||| | || || | ||| ||| || Sbjct 15786 AATACGTTTAGAATTATCTGGACCTGGGGTTC---AGTACATAGCAG--ATAACCAGCTA 15732 Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 || || | |||| || || ||||| | | |||||||| || | |||||||| | | Sbjct 15731 TATAATAGTGTTATAACAGCCCATGCTATATTAATGATTTTTTTCATGGTTATGCCTGCT 15672 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 | ||||| ||||| || |||| || | ||| | | || || | |||||||||||| Sbjct 15671 TTAATAGGAGGTTTTGGTAATTTTTTATTACCTATTTTAATAGGAGGTCCTGATATGGCA 15612 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 ||||| || | || ||||||||||||||| || || Sbjct 15611 TTTCCTAGATTAAATAATATAAGTTTTTGACTATTA 15576 Score = 131 bits (144), Expect = 4e-25 Identities = 196/276 (71%), Gaps = 7/276 (3%) Strand=Plus/Plus Query 7440 AACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGAT 7499 || ||||||||||||||||| | ||||| ||| | |||||||| |||||| | || Sbjct 19815 AATGTTATATTTAATATTTGCTTTATTTTCAGGTTTGATAGGTACAGCTTTTTCTGTTAT 19874 Query 7500 TATAAGGTTAGAATTAGCTGCTCC--GGGTTCTCAAATATTGAGTGGTAATAGCCAACTT 7557 ||| | ||||||||| ||| || |||||| | || || | ||| ||| || Sbjct 19875 AATACGTTTAGAATTATCTGGACCTGGGGTTC---AGTACATAGCAG--ATAACCAGCTA 19929 Query 7558 TACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTT 7617 || || | |||| || || ||||| | | |||||||| || | |||||||| | | Sbjct 19930 TATAATAGTGTTATAACAGCCCATGCTATATTAATGATTTTTTTCATGGTTATGCCTGCT 19989 Query 7618 ATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCT 7677 | ||||| ||||| || |||| || | ||| | | || || | |||||||||||| Sbjct 19990 TTAATAGGAGGTTTTGGTAATTTTTTATTACCTATTTTAATAGGAGGTCCTGATATGGCA 20049 Query 7678 TTTCCAAGGCTTAACAATATAAGTTTTTGATTACTA 7713 ||||| || | || ||||||||||||||| || || Sbjct 20050 TTTCCTAGATTAAATAATATAAGTTTTTGACTATTA 20085 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| |||||||| |||||||| | ||||||||| | |||||||| ||||| || | Sbjct 13961 TTCAGGGTGACCAAAGAATCAGAAAAGATGTTGATATAATATAGGATCACCTCCTCCAGC 14020 Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | ||||| |||| | ||||||||||||||||| ||||| || Sbjct 14021 TAATTCAAAGAAAGAT-GTATTAAAATTTCTATCTGTTAATAC 14062 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/103 (82%), Gaps = 2/103 (2%) Strand=Plus/Minus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 |||||| |||||||| |||||||| | ||||||||| | |||||||| ||||| || | Sbjct 21700 TTCAGGGTGACCAAAGAATCAGAAAAGATGTTGATATAATATAGGATCACCTCCTCCAGC 21641 Query 370732 TGGATCAAA-AAAGCTAGTATTAAAATTTCTATCAGTTAAAAC 370773 | ||||| |||| | ||||||||||||||||| ||||| || Sbjct 21640 TAATTCAAAGAAAGAT-GTATTAAAATTTCTATCTGTTAATAC 21599 >seq103 Length=249856 Score = 89.7 bits (98), Expect = 1e-12 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 || || || |||||||| || |||||||| | ||| || |||||||| || || || ||| Sbjct 43229 CCGTCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCCTCC 43288 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| ||||| || ||| ||| ||||| ||||| || || || || | ||| Sbjct 43289 TTGTCCTGGATTTTACTCTTGACATTGTCGATAGTGTCGCTGGACTCGACCTCAAGGGTG 43348 Query 225676 ATCGTCTTGCCCGT 225689 || ||||||||||| Sbjct 43349 ATGGTCTTGCCCGT 43362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192529549834952