Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq73 132 4e-26 >seq73 Length=4627324 Score = 132 bits (146), Expect = 4e-26 Identities = 216/309 (70%), Gaps = 8/309 (3%) Strand=Plus/Minus Query 4813 CTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGCAA 4872 ||||| |||| ||||| || || ||| || | ||||| || |||||||| || | Sbjct 220696 CTTGA-TATATGTGTCGATGAGGAGGGAGTAGGTCTCAGAGTGAATATTTTCCATCATGA 220638 Query 4873 TCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTA 4932 |||| || ||||| ||||| | ||| || | || |||||||| | || | || | Sbjct 220637 TCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAACCTGAACTTCTCCGCTGAAACGCTCGA 220578 Query 4933 CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAA 4992 | | ||||||||| || || || || || || || || ||||| || || || || | Sbjct 220577 CCAGGTTTTCGTTGACGATGCCATCCGACGCGGCGAAGAATGCCAAGACGTGTGAGATGA 220518 Query 4993 AGTACTGTTCGTCAGGCTTAAGT---TTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAA 5049 ||||| | |||||| || | | || ||||||| | | | ||||| | | ||||| Sbjct 220517 AGTACCGCTCGTCATCATTCAATCTGTTGTTCCAGTCGTGAAGGTCTTTTGAGAGATCAA 220458 Query 5050 CTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGAT 5109 |||||| | ||||| |||||||| || |||||||||||||| |||||| | || Sbjct 220457 TTTCTTCTGCGGTCCAGAACGACGCCTCTGCTTTTTTGTACATTTGCCAAATCT----AT 220402 Query 5110 ACTGAATCG 5118 | ||||||| Sbjct 220401 AGTGAATCG 220393 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427049037895964