Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq79 264 2e-65 seq73 125 1e-23 >seq79 Length=405269 Score = 264 bits (292), Expect = 2e-65 Identities = 598/896 (67%), Gaps = 6/896 (1%) Strand=Plus/Plus Query 76520 TCAAATTCATCTCCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGAC 76579 ||||| || || || | ||||| |||| || || |||||| || || | | | | Sbjct 293930 TCAAACTCGTCGCCATAGACATCCGCCAAGCCTGGGGCTTCATTGGGGCAAAAGAGAGTC 293989 Query 76580 CACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 76639 || || |||| || || ||| ||||||||||| ||||| ||| |||| ||||| | || Sbjct 293990 CATTCGCCATTTTTCTCAACACGTTTCATAAACAGATCGGGTGTCCAGAGAGCCAGGAAG 294049 Query 76640 AGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATA 76699 ||||| || | | | ||| || ||||| ||||| ||| || | ||| || | Sbjct 294050 AGATCGCGAGCCCGAACTTCCTCCTTTCCGTGGTTCTTACGAAGGTCCAAGAATTCGAAG 294109 Query 76700 ATATCAGAATGCCATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCC 76759 ||||| | ||||| || || || || || || | | | ||||| || || ||||||||| Sbjct 294110 ATATCGGTGTGCCACGGCTCAAGGTAAATAGCGAAAGCTCCCGGCCGCTTGTTACCTCCC 294169 Query 76760 TGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGAT 76819 || || | |||||| |||||||| || |||||| || ||| |||| || ||||| || Sbjct 294170 TGGTCGACATATCTAGCAGTGTTGTTGAAAACTCGCAGCATGGGAACGATTCCGTTGGAG 294229 Query 76820 GTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCT 76879 | ||||| ||||| | ||| ||| ||| ||||||| ||| ||||| Sbjct 294230 GAGCCATTCGTTCCGGCAATGTAAGAACCAGTGCCACGAATGCGGTGAATGTTGAGGCCA 294289 Query 76880 ATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCT 76939 || || || || | || || || | ||||| ||||| ||||| || || ||||| Sbjct 294290 ATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTGTCGTAAATACCCTCG 294349 Query 76940 ATACTATCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 76999 ||||| || ||| |||||| | ||| || || || ||| ||| | || || || Sbjct 294350 ATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGAGGTTGCGGGGTACCA 294409 Query 77000 GCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTT 77059 ||||| || | |||||||| ||||| ||||| |||||| ||| | || || |||||| Sbjct 294410 GCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGACATGAGGTTATATGTT 294469 Query 77060 TCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGC 77119 || || ||| |||| ||| | |||||||| ||||| |||||||| | ||| || Sbjct 294470 TCGATGACTTTCTCTACATCGTCTCCGTGAATTCCGACAGCAACACGCATGATCATGTGT 294529 Query 77120 TGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTA 77179 || || ||||| || || || ||| | ||| || || |||||||| || Sbjct 294530 TGGGGGCGTTCAGCAACTTTGCCGTTGATTCGAAGCAAATAAGACCGCTCCAAAGTCTTG 294589 Query 77180 AAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCC 77239 || || || || | ||| ||||| | || || | ||| | ||||| | || || Sbjct 294590 AATCCGAAGTATTGGTAGTTGAAGTCACGATCATAGACAATGGCAGAATTAAATTCATC- 294648 Query 77240 TTATATTTGGTAACAATATCCATGACAGTG---GTAGAAATAATTGGAGATCGTATTCCA 77296 | || | | | || | | || ||| || || || || | || | | Sbjct 294649 -TGCATGTCGCATCACTGTTTCGTAC-GTGCCCTGCGATATCATCGGGGCAGGTCGTTGA 294706 Query 77297 TTTTTAGGATTAACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTT 77356 || || || |||| ||| | | | ||| || || ||| || |||| || ||| Sbjct 294707 TTCTTCGGGTTAATATAATGGTACAGGTCATCTATCACGGAAGAGAACTGTTTCTTAGTT 294766 Query 77357 TCCTTGTGTAGATTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATG 77412 | |||||| ||||| ||||| ||||| | |||||||| || |||||||| ||||| Sbjct 294767 TGCTTGTGGAGATTGGATACAGCTATCCGGGCAGCTAGGATGGCATAGTCTGGATG 294822 >seq73 Length=4627324 Score = 125 bits (138), Expect = 1e-23 Identities = 333/504 (66%), Gaps = 11/504 (2%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 || ||||| || || ||||| || ||||| || || || ||||| ||| || || || Sbjct 221310 TTCTGGTAGTCGCCGACACGCTTTTCGAAGAAGTTGGTCTTGCCGGCCAGGGAGATGTTG 221251 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 ||||| || ||||| || || || ||||| | ||| || || || | | Sbjct 221250 TCCATGAAGTCAAATGGGTTGGTGGAGTTATAGACTTTCTTGTTGCCCAAAGCAACGAGG 221191 Query 46459 AGTCTATCTGCAACGAATTCTATATACGTTTTCATCAT----TTCACAATTCATTCCTAT 46514 || | ||| || ||||| || || || || || ||| || | |||||||| | Sbjct 221190 AGGCGATCAGCGACGAACTCAATGTA--TTGGCA-CATGAGCTTGGCG-TTCATTCCAAG 221135 Query 46515 GAGTTTGACCGGTAGAGCCTCCGTAAGAAACTCTTGTTCAATAGTGACAGCATCCGATAT 46574 || |||||| ||||| || | ||| ||||| || || ||||||||||| || | || Sbjct 221134 AAGCGCGACCGGGAGAGCATCTGAAAGGAACTCCTGCTCGATAGTGACAGCTTCAGTGAT 221075 Query 46575 TATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGC 46634 ||| || | || | || || | || ||| || || | | ||| || Sbjct 221074 GATCCTCTCGACAGCCTCTTGGCTGGGACGGTGACGCAAGTGAGAGAAGAGGAGACAGGC 221015 Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694 |||||| || | ||| || || | | ||| | ||||||||||| || || ||||| Sbjct 221014 GAAATCAGTGTGTAAGCCCTCGTCACGAGAAATAAGCTCGTTAGAAAACGTAAGGCCAGG 220955 Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754 ||| || || || || || | ||| || || | ||||| |||||| ||||| ||||| Sbjct 220954 CATGAGGCCCCGTTTCTTCAACCAGAAGATCGAAGCGAAGGATCCACTGAAGAAGATGCC 220895 Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTA---TGAATCCA 46811 ||| || || ||||| ||||| || | || | | | ||| || ||| | ||||| Sbjct 220894 TTCGACGGCAGCGAAGGCGACGAGACGCTGTGCAAAGGTGGACTCCTTATCTTCGATCCA 220835 Query 46812 CCTTTGAGCCCAATCAGCCTTTTT 46835 || ||||||||||||||| || Sbjct 220834 CCGGATAGCCCAATCAGCCTTCTT 220811 Score = 93.3 bits (102), Expect = 6e-14 Identities = 175/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || || ||||| ||||| || ||||| || ||||| || || | || || | || | Sbjct 220662 TCAGAGTGAATATTTTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAACC 220603 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 || || ||| | || || || || || || || || || ||||| || || Sbjct 220602 TGAACTTCTCCGCTGAAACGCTCGACCAGGTTTTCGTTGACGATGCCATCCGACGCGGCG 220543 Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCAG 47103 || |||||||| || ||| || || || || || | ||| | || |||||| Sbjct 220542 AAGAATGCCAAGACGTGTGAGATGAAGTACCGCTCGTCATCATTCAATCTGTTGTTCCAG 220483 Query 47104 TCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTT 47163 || | | |||||||| | ||| | |||||| || |||||||| ||||||||||||||| Sbjct 220482 TCGTGAAGGTCTTTTGAGAGATCAATTTCTTCTGCGGTCCAGAACGACGCCTCTGCTTTT 220423 Query 47164 TTATACATATTCCATAT 47180 || ||||| | ||| || Sbjct 220422 TTGTACATTTGCCAAAT 220406 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712933437538560