Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq75 150 4e-31 seq79 86.0 1e-11 >seq75 Length=1151455 Score = 150 bits (166), Expect = 4e-31 Identities = 161/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || || ||||||||||| ||||| || | | |||| || || Sbjct 638954 AGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGAGAGTGTTCGGCCGTCC 639013 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || ||| ||||||||||| || | |||||||| | | ||| ||||| || ||| Sbjct 639014 TCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGGGATACCTTCTTTATCT 639073 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||| || | || | | | ||||| || || |||||||||||||| ||| Sbjct 639074 TGAATTTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGACTTCAAGAGTAATCGTT 639133 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCATT 152105 ||||| || || ||||| ||||||| ||||||| Sbjct 639134 TTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 120 bits (132), Expect = 7e-22 Identities = 149/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 151901 ATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTAGGCT 151960 ||| ||||| ||| || || ||||| ||||| | | || | ||||||||||| Sbjct 638734 ATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCATCTTCTAGCTG 638793 Query 151961 TTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAATTTT 152020 || || || ||||| || | |||||| || | | || |||||||| ||||| ||||| Sbjct 638794 CTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTTATCTTGGATTTT 638853 Query 152021 TTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGCCCGT 152080 ||| || | || | |||| || ||||| |||||||| || ||||||||||| || Sbjct 638854 GCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGATAGTTTTGCCGGT 638913 Query 152081 GAGAGTCTTCACGAAGACCTGCAT 152104 ||||| |||||||||| |||||| Sbjct 638914 CAGAGTTTTCACGAAGATCTGCAT 638937 Score = 105 bits (116), Expect = 2e-17 Identities = 147/204 (72%), Gaps = 4/204 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||||||||| || || || |||||||||||||| ||||||| || || | |||||| Sbjct 639182 AGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGACAAGGTACGGCCATCT 639241 Query 151953 TCTAG--GCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || || ||||| || |||||||| | | |||||||| | | ||| ||||| || | Sbjct 639242 TCGAGCTGCTTT--CCAGCGAAGATCAAACGTTGCTGGTCTGGGGGGATGCCTTCTTTAT 639299 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 | || ||||| || || | || | | | || ||| || || || | ||||||| Sbjct 639300 CCTGGATTTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCACCTCCAAGGTAATAG 639359 Query 152071 TTTTGCCCGTGAGAGTCTTCACGA 152094 | ||||| ||||| || || |||| Sbjct 639360 TCTTGCCAGTGAGGGTTTTGACGA 639383 >seq79 Length=405269 Score = 86.0 bits (94), Expect = 1e-11 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 115641 TGGACATCTGATCTTTTTATGAAGCGAGTCAAGGCAAACGGAATGTGGAGCCTCTTTTGT 115700 |||||| | ||||| |||||||| || || || ||| || |||| |||||||| Sbjct 294036 TGGACACCCGATCTGTTTATGAAACGTGTTGAGAAAAATGGCGAATGGACTCTCTTTTGC 293977 Query 115701 CCCAATGAAGCCCCTGGTCTTGATGATGTTTATGGTCCAGAGTTTGAGAATCTTTACGAA 115760 |||||||||||||| || | | ||||| ||||| ||||||||| ||||||||| Sbjct 293976 CCCAATGAAGCCCCAGGCTTGGCGGATGTCTATGGCGACGAGTTTGAGGCTCTTTACGAG 293917 Query 115761 AGGTACG 115767 | ||||| Sbjct 293916 AAGTACG 293910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153819203400468