Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq75 168 1e-36 seq73 118 2e-21 seq103 111 3e-19 seq49 105 1e-17 seq52 89.7 1e-12 seq1 84.2 5e-11 >seq75 Length=1151455 Score = 168 bits (186), Expect = 1e-36 Identities = 177/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | ||| |||||||||||| |||||||| | Sbjct 638938 ACCACCACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGA 638997 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| ||||| || ||||| ||||| ||||| | ||||| ||||| || Sbjct 638998 GAGTGTTCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGG 639057 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050 ||||| || || ||||| || ||||||||| ||| | || || || || || ||||| Sbjct 639058 GATACCTTCTTTATCTTGAAT-TTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGA 639116 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 |||| ||||| ||||| || || |||| ||||||||||| ||||||||| Sbjct 639117 CTTCAAGAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166 Score = 141 bits (156), Expect = 2e-28 Identities = 166/219 (76%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931 |||||||| |||||||| || ||||| | ||| ||||||||||||||| || || | | Sbjct 639167 CCACCACGGAGGCGAAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGAC 639226 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || |||||||| || || || || || || |||||||||||||| ||||| || Sbjct 639227 AAG-GTACGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGG 639285 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 || || || || || ||||| |||||| |||||| | ||||| || ||||||| ||| | Sbjct 639286 GATGCCTTCTTTATCCTGGAT-TTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCA 639344 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | || | || || ||||| || || | || || |||| Sbjct 639345 CCTCCAAGGTAATAGTCTTGCCAGTGAGGGTTTTGACGA 639383 Score = 105 bits (116), Expect = 1e-17 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || ||||| || || || |||| || | || || || |||||||||||||| | Sbjct 639482 CCTCCACGGAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAC 639541 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| || || ||||| || || || ||||| | ||||| |||||| || Sbjct 639542 AGGGTACGGCCGTCTTCCAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAGGG 639601 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| |||||||| ||||| || | || || | |||||||| || | || || Sbjct 639602 ATACCTTCCTTGTCCTGGATTTTGGACTTGACTGCGTCGATAGTATCACCTGACTCAACG 639661 Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075 ||||||||||| ||||| || || Sbjct 639662 TCGAGAGTGATGGTCTTTCCGGT 639684 >seq73 Length=4627324 Score = 118 bits (130), Expect = 2e-21 Identities = 175/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222 ||| |||| |||| || | | || |||||||| ||| || ||| | || | Sbjct 221072 ATCATCACTGAAGCTGTCACTATCGAGCAGGAGTTCCTTTCAGATGCTCTCCCGGTCGCG 221131 Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282 ||| | || ||||| || | |||||| | ||||| || || ||||| |||||||| | Sbjct 221132 CTTCTTGGAATGAACGCCAAGCTCATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTC 221191 Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342 |||| || | || || ||||||| |||||||||| ||||| || | || ||||| Sbjct 221192 CTCGTTGCTTTGGGCAACAAGAAAGTCTATAACTCCACCAACCCATTTGACTTCATGGAC 221251 Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402 ||| || || || || || ||||||||||||||||||||| |||| || || | | Sbjct 221252 AACATCTCCCTGGCCGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGCGACTACCAGAAG 221311 Query 230403 CCCGGTGT 230410 ||||||| Sbjct 221312 GCCGGTGT 221319 >seq103 Length=249856 Score = 111 bits (122), Expect = 3e-19 Identities = 139/188 (74%), Gaps = 2/188 (1%) Strand=Plus/Plus Query 282904 TGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGG 282963 ||| | | || || ||||| || || |||||| ||||| ||||| || || || |||| Sbjct 43191 TGCCTACCTTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGG 43250 Query 282964 CAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTT 283022 | |||||||| || || ||||| || || ||||||||||| ||||| ||| || || Sbjct 43251 CGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGAT-TTTACTCTTG 43309 Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082 || | ||||||||||| | ||||| || || ||||| ||||| ||||| | ||| Sbjct 43310 ACATTGTCGATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTC 43369 Query 283083 TTAACGAA 283090 || ||||| Sbjct 43370 TTGACGAA 43377 >seq49 Length=1984306 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || | || |||||||| ||||||||||| | Sbjct 95356 ACCACCACGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGA 95415 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || ||||||||||| || ||||| ||||| ||||||| ||||| ||||| || Sbjct 95416 AAGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGG 95475 Query 282992 AATACCCTCCTTGTCT 283007 || ||||| |||||| Sbjct 95476 GATTCCCTCTTTGTCT 95491 >seq52 Length=747234 Score = 89.7 bits (98), Expect = 1e-12 Identities = 201/289 (70%), Gaps = 10/289 (3%) Strand=Plus/Plus Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAA-CA 274489 |||||||| |||||||||| ||| ||| || |||| |||| |||||||||| || Sbjct 583505 ACGATGGGTGTGATAAATTCGATCAAGAACTGCGGTATTTTAAGCAAACTGGGGAAAGCA 583564 Query 274490 ACTATGGAAAAAGTTCATGACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTGT 274549 ||| || | |||||| || | || || || ||| ||||||| || ||| || Sbjct 583565 ACT-TGAAGAAAGTTGATTAATAGGCCCTTAATATGACTTCCGTCGTGATCTTGATCAGT 583623 Query 274550 CATGATCATAACATGTCCATACCGAAGCGAGGAAGTATCTTTATACAACTTCCCTGT-TT 274608 ||||||||| | ||| || || || || || || ||||| ||| | ||| | Sbjct 583624 CATGATCATGAGATGCCCGTAGCGGAGGCCCTTTGTGTCAGTATACTCCTT-CTTGTGCT 583682 Query 274609 GAAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATA-CT-CGCCA 274665 | |||||||||| | |||| | | | ||||||| | || |||| |||| || | | Sbjct 583683 GTAGCCCAAGAAAGTTTTTGATGTTCTG-GATTTCTGCATT-TTTG-GATATCTGATCAA 583739 Query 274666 CAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCC 274714 | || || || || ||||| |||| ||| || ||||||||||| || || Sbjct 583740 CGGAGGCGTCCCGGACGTTAAGCAGCTTTCCTCGGAGAGGGAATACACC 583788 >seq1 Length=2209569 Score = 84.2 bits (92), Expect = 5e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 316710 CAGATAGTCGATCAGCCAGCTCACATTCGACACAGAAAGATGGTTGGTCGGTTCGTCAAG 316769 |||||| || ||||| ||||||||| ||| | ||| ||||||||||||||||| Sbjct 525486 CAGATATTCCTGTAGCCATTTCACATTCGCTACATCCAAATGATTGGTCGGTTCGTCAAG 525427 Query 316770 TAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGAGCAAGCTTCATTTTCCACCC 316829 |||| | | || ||| |||||||| ||||| || || |||||||| ||||| || Sbjct 525426 AAGTAAAACATCAGCTCCCATTAGCATAGCTCGTGCCAGCGCCAGCTTCATCTTCCATCC 525367 Query 316830 CCCGGAAAG 316838 || ||||| Sbjct 525366 GCCTGAAAG 525358 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046737751574632