Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq75 168 1e-36
seq73 118 2e-21
seq103 111 3e-19
seq49 105 1e-17
seq52 89.7 1e-12
seq1 84.2 5e-11
>seq75
Length=1151455
Score = 168 bits (186), Expect = 1e-36
Identities = 177/230 (77%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
||||||||| || ||||| || || || | ||| |||||||||||| |||||||| |
Sbjct 638938 ACCACCACGAAGACGAAGGACAAGGTGGAGTGTGGATTCTTTTTGGATATTGTAGTCTGA 638997
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
|| || ||||| ||||| || ||||| ||||| ||||| | ||||| ||||| ||
Sbjct 638998 GAGTGTTCGGCCGTCCTCAAGCTGTTTTCCGGCGAAGATGAGTCGTTGCTGGTCTGGTGG 639057
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTT-ACGGTATCGATAGTGTCCGAAGCTTCGA 283050
||||| || || ||||| || ||||||||| ||| | || || || || || |||||
Sbjct 639058 GATACCTTCTTTATCTTGAAT-TTTGCTTTTAACGTTGTCAATGGTATCTGAGCTTTCGA 639116
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100
|||| ||||| ||||| || || |||| ||||||||||| |||||||||
Sbjct 639117 CTTCAAGAGTAATCGTTTTGCCGGTCAGGGTCTTAACGAAGATCTGCATT 639166
Score = 141 bits (156), Expect = 2e-28
Identities = 166/219 (76%), Gaps = 4/219 (2%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-C 282931
|||||||| |||||||| || ||||| | ||| ||||||||||||||| || || | |
Sbjct 639167 CCACCACGGAGGCGAAGGACAAGATGGAGGGTGGATTCTTTTTGGATGTTATAATCGGAC 639226
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || |||||||| || || || || || || |||||||||||||| ||||| ||
Sbjct 639227 AAG-GTACGGCCATCTTCGAGCTGCTTTCCAGCGAAGATCAAACGTTGCTGGTCTGGGGG 639285
Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCT-TTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050
|| || || || || ||||| |||||| |||||| | ||||| || ||||||| ||| |
Sbjct 639286 GATGCCTTCTTTATCCTGGAT-TTTGCTCTTTACGTTGTCGATGGTATCCGAAGATTCCA 639344
Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089
| || | || || ||||| || || | || || ||||
Sbjct 639345 CCTCCAAGGTAATAGTCTTGCCAGTGAGGGTTTTGACGA 639383
Score = 105 bits (116), Expect = 1e-17
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932
|| ||||| || || || |||| || | || || || |||||||||||||| |
Sbjct 639482 CCTCCACGGAGACGGAGAACCAAGTGAAGGGTAGACTCCTTCTGGATGTTGTAGTCTGAC 639541
Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992
|| || ||||| || || ||||| || || || ||||| | ||||| |||||| ||
Sbjct 639542 AGGGTACGGCCGTCTTCCAGTTGCTTGCCAGCGAAGATAAGGCGTTGCTGGTCAGGAGGG 639601
Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052
||||| |||||||| ||||| || | || || | |||||||| || | || ||
Sbjct 639602 ATACCTTCCTTGTCCTGGATTTTGGACTTGACTGCGTCGATAGTATCACCTGACTCAACG 639661
Query 283053 TCGAGAGTGATCGTCTTACCCGT 283075
||||||||||| ||||| || ||
Sbjct 639662 TCGAGAGTGATGGTCTTTCCGGT 639684
>seq73
Length=4627324
Score = 118 bits (130), Expect = 2e-21
Identities = 175/248 (71%), Gaps = 0/248 (0%)
Strand=Plus/Plus
Query 230163 ATCGTCACAGAAGTAGTTGCAAATGAAAAGGAGTTCATTTGCGACGCTATTCCTTGCCGT 230222
||| |||| |||| || | | || |||||||| ||| || ||| | || |
Sbjct 221072 ATCATCACTGAAGCTGTCACTATCGAGCAGGAGTTCCTTTCAGATGCTCTCCCGGTCGCG 221131
Query 230223 CTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTATT 230282
||| | || ||||| || | |||||| | ||||| || || ||||| |||||||| |
Sbjct 221132 CTTCTTGGAATGAACGCCAAGCTCATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTC 221191
Query 230283 TTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGGAG 230342
|||| || | || || ||||||| |||||||||| ||||| || | || |||||
Sbjct 221192 CTCGTTGCTTTGGGCAACAAGAAAGTCTATAACTCCACCAACCCATTTGACTTCATGGAC 221251
Query 230343 CTCATTTCACTCCAGGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGCGATTATCAAAGG 230402
||| || || || || || ||||||||||||||||||||| |||| || || | |
Sbjct 221252 AACATCTCCCTGGCCGGCAAGACCAACTTCTTCGAAAAGCGTGTCGGCGACTACCAGAAG 221311
Query 230403 CCCGGTGT 230410
|||||||
Sbjct 221312 GCCGGTGT 221319
>seq103
Length=249856
Score = 111 bits (122), Expect = 3e-19
Identities = 139/188 (74%), Gaps = 2/188 (1%)
Strand=Plus/Plus
Query 282904 TGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGG 282963
||| | | || || ||||| || || |||||| ||||| ||||| || || || ||||
Sbjct 43191 TGCCTACCTTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGG 43250
Query 282964 CAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCT-TTT 283022
| |||||||| || || ||||| || || ||||||||||| ||||| ||| || ||
Sbjct 43251 CGAAGATCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGAT-TTTACTCTTG 43309
Query 283023 ACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTC 283082
|| | ||||||||||| | ||||| || || ||||| ||||| ||||| | |||
Sbjct 43310 ACATTGTCGATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTC 43369
Query 283083 TTAACGAA 283090
|| |||||
Sbjct 43370 TTGACGAA 43377
>seq49
Length=1984306
Score = 105 bits (116), Expect = 1e-17
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931
|||||||||||| || || || || || | || |||||||| ||||||||||| |
Sbjct 95356 ACCACCACGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGA 95415
Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991
||| || ||||||||||| || ||||| ||||| ||||||| ||||| ||||| ||
Sbjct 95416 AAGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGG 95475
Query 282992 AATACCCTCCTTGTCT 283007
|| ||||| ||||||
Sbjct 95476 GATTCCCTCTTTGTCT 95491
>seq52
Length=747234
Score = 89.7 bits (98), Expect = 1e-12
Identities = 201/289 (70%), Gaps = 10/289 (3%)
Strand=Plus/Plus
Query 274431 ACGATGGGCGTGATAAATTTCTTCAGGAAACCTGGAATTTCTAGCAGACTGGGGAAA-CA 274489
|||||||| |||||||||| ||| ||| || |||| |||| |||||||||| ||
Sbjct 583505 ACGATGGGTGTGATAAATTCGATCAAGAACTGCGGTATTTTAAGCAAACTGGGGAAAGCA 583564
Query 274490 ACTATGGAAAAAGTTCATGACAAGACCTGATATGTGAGTTCCGTCAACGTCGGCATCTGT 274549
||| || | |||||| || | || || || ||| ||||||| || ||| ||
Sbjct 583565 ACT-TGAAGAAAGTTGATTAATAGGCCCTTAATATGACTTCCGTCGTGATCTTGATCAGT 583623
Query 274550 CATGATCATAACATGTCCATACCGAAGCGAGGAAGTATCTTTATACAACTTCCCTGT-TT 274608
||||||||| | ||| || || || || || || ||||| ||| | ||| |
Sbjct 583624 CATGATCATGAGATGCCCGTAGCGGAGGCCCTTTGTGTCAGTATACTCCTT-CTTGTGCT 583682
Query 274609 GAAGCCCAAGAATTTGCTTGA-GAGCGGTGATTTCTTCGTTCTTTGTGATA-CT-CGCCA 274665
| |||||||||| | |||| | | | ||||||| | || |||| |||| || | |
Sbjct 583683 GTAGCCCAAGAAAGTTTTTGATGTTCTG-GATTTCTGCATT-TTTG-GATATCTGATCAA 583739
Query 274666 CAGAAGCATCACGTACGTTCAGCAACTTACCGCGGAGAGGGAAAACGCC 274714
| || || || || ||||| |||| ||| || ||||||||||| || ||
Sbjct 583740 CGGAGGCGTCCCGGACGTTAAGCAGCTTTCCTCGGAGAGGGAATACACC 583788
>seq1
Length=2209569
Score = 84.2 bits (92), Expect = 5e-11
Identities = 96/129 (74%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 316710 CAGATAGTCGATCAGCCAGCTCACATTCGACACAGAAAGATGGTTGGTCGGTTCGTCAAG 316769
|||||| || ||||| ||||||||| ||| | ||| |||||||||||||||||
Sbjct 525486 CAGATATTCCTGTAGCCATTTCACATTCGCTACATCCAAATGATTGGTCGGTTCGTCAAG 525427
Query 316770 TAGTAGTAGCTTCGCGTCCAACAGCATAGCGCGTGCGAGAGCAAGCTTCATTTTCCACCC 316829
|||| | | || ||| |||||||| ||||| || || |||||||| ||||| ||
Sbjct 525426 AAGTAAAACATCAGCTCCCATTAGCATAGCTCGTGCCAGCGCCAGCTTCATCTTCCATCC 525367
Query 316830 CCCGGAAAG 316838
|| |||||
Sbjct 525366 GCCTGAAAG 525358
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046737751574632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |