Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_033775.1
Length=376207
Score E
Sequences producing significant alignments: (Bits) Value
seq75 174 4e-38
seq103 116 9e-21
seq49 111 4e-19
>seq75
Length=1151455
Score = 174 bits (192), Expect = 4e-38
Identities = 162/206 (79%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || ||||| || || || || || |||||||| || || || || |||||||||||
Sbjct 639162 CAGATCTTCGTTAAGACCCTGACCGGCAAAACGATTACTCTTGAAGTCGAAAGCTCAGAT 639103
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
||||| || ||||| ||| || ||||| || |||||||| ||||| || |||||||||
Sbjct 639102 ACCATTGACAACGTTAAAAGCAAAATTCAAGATAAAGAAGGTATCCCACCAGACCAGCAA 639043
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
||||| |||||||||||||||||||| || || || | || || | || || || ||
Sbjct 639042 CGACTCATCTTCGCCGGAAAACAGCTTGAGGACGGCCGAACACTCTCAGACTACAATATC 638983
Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129
||||||||||| ||||| || |||||
Sbjct 638982 CAAAAAGAATCCACACTCCACCTTGT 638957
Score = 174 bits (192), Expect = 4e-38
Identities = 160/200 (80%), Gaps = 2/200 (1%)
Strand=Plus/Minus
Query 177931 TCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCG 177990
|||| ||||| ||||| || || || || ||| | ||||||||| || || |||||||
Sbjct 639383 TCGTCAAAACCCTCACTGGCAAGACTATTACCTTGGAGGTGGAATCTTCGGATACCATCG 639324
Query 177991 AGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTA 178050
| ||||| || || || ||||| |||||||| ||||| || ||||||||||| | |
Sbjct 639323 ACAACGTAAAGAGCAAAATCCAGGATAAAGAAGGCATCCCCCCAGACCAGCAACGTTTGA 639264
Query 178051 TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAACGTCCAAAAA 178109
||||||| ||||| |||||||||||||| | || |||| ||||||||||| ||||||||
Sbjct 639263 TCTTCGCTGGAAAGCAGCTCGAAGATGGCCGTAC-CTTGTCCGATTATAACATCCAAAAA 639205
Query 178110 GAATCAACACTGCATCTTGT 178129
||||| || || ||||||||
Sbjct 639204 GAATCCACCCTCCATCTTGT 639185
Score = 136 bits (150), Expect = 1e-26
Identities = 158/213 (74%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983
|| || |||||||||||||| || || ||||| ||||| || || || || ||||| |||
Sbjct 638934 CAGATCTTCGTGAAAACTCTGACCGGCAAAACTATCACACTTGAAGTCGAGAGCTCCGAC 638875
Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043
|| || || ||||| ||| || || || || || ||||| || || || || |||||
Sbjct 638874 ACAATTGATAACGTAAAAAGCAAAATCCAAGATAAGGAAGGGATTCCACCAGATCAGCAG 638815
Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103
|| || ||||| || || || ||||| |||||||| |||| ||| | ||||||||| |
Sbjct 638814 CGTCTCATCTTTGCTGGTAAGCAGCTAGAAGATGGCCGGACGCTTTCTGATTATAACATT 638755
Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTTGAGA 178136
|| || || || || ||| | || ||||||
Sbjct 638754 CAGAAGGAGAGCACTCTCCATTTGGTGTTGAGA 638722
Score = 98.7 bits (108), Expect = 2e-15
Identities = 137/189 (72%), Gaps = 5/189 (3%)
Strand=Plus/Minus
Query 177945 ACAGGAAAAACGATCACCCTCGAGGTGGAA--AGCTCAGACACCATCGAGAACGTCAAAC 178002
|| ||||| || ||||| ||||| || || || | || || ||||| |||||
Sbjct 639684 ACCGGAAAGACCATCACTCTCGACGTTGAGTCAGGT--GATACTATCGACGCAGTCAAGT 639627
Query 178003 AAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAA 178062
|| || |||||||| ||||| |||||||| ||||||||||| ||||||||||| || |
Sbjct 639626 CCAAAATCCAGGACAAGGAAGGTATCCCTCCTGACCAGCAACGCCTTATCTTCGCTGGCA 639567
Query 178063 AACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGC 178122
| || || ||||| || | || || | || || ||| |||| || || || || || |
Sbjct 639566 AGCAACTGGAAGACGGCCGTACCCTGTCAGACTACAACATCCAGAAGGAGTCTACCCTTC 639507
Query 178123 ATCTTGTTT 178131
| |||| ||
Sbjct 639506 A-CTTGGTT 639499
>seq103
Length=249856
Score = 116 bits (128), Expect = 9e-21
Identities = 133/179 (74%), Gaps = 0/179 (0%)
Strand=Plus/Minus
Query 177930 TTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATC 177989
||||| || || || || || || || |||||||| ||||| || | ||||| |||
Sbjct 43377 TTCGTCAAGACCCTAACGGGCAAGACCATCACCCTTGAGGTCGAGTCCAGCGACACTATC 43318
Query 177990 GAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTT 178049
|| || ||||| || || |||||||| || || ||||| || |||||||| ||| |
Sbjct 43317 GACAATGTCAAGAGTAAAATCCAGGACAAGGAGGGCATCCCACCCGACCAGCAGCGATTG 43258
Query 178050 ATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAA 178108
||||||||||| || ||||| || || || |||| ||| |||||||||| | || ||
Sbjct 43257 ATCTTCGCCGGCAAGCAGCTTGAGGACGGCCGGACGCTTAGCGATTATAACATTCAGAA 43199
>seq49
Length=1984306
Score = 111 bits (122), Expect = 4e-19
Identities = 94/116 (81%), Gaps = 0/116 (0%)
Strand=Plus/Minus
Query 178014 GACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAA 178073
|||||||| |||||||| || ||||||||||| || ||||||||||| |||||||||||
Sbjct 95490 GACAAAGAGGGAATCCCCCCCGACCAGCAACGCCTGATCTTCGCCGGCAAACAGCTCGAG 95431
Query 178074 GATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGT 178129
||||| | || ||| |||| || ||| | |||||||| || || || || || ||
Sbjct 95430 GATGGCCGTACCCTTTCCGACTACAACATTCAAAAAGAGTCGACCCTTCACCTCGT 95375
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1203729534336952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |