Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04-
25] 108 sequences; 35,498,521 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq103 122 8e-23
seq75 96.9 3e-15
seq49 93.3 4e-14
>seq103
Length=249856
Score = 122 bits (134), Expect = 8e-23
Identities = 138/183 (75%), Gaps = 4/183 (2%)
Strand=Plus/Plus
Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732
|||||||||||||||| ||| || || || |||| || ||||||||||||||||| |
Sbjct 43197 CCTTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 43256
Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790
||| ||||| ||||| | || | || |||||||||| |||||| ||| || |
Sbjct 43257 TCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGT 43316
Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850
|| | ||||||||| ||||| ||||| | || || || || ||||| || ||||| ||
Sbjct 43317 CG--ATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 43374
Query 41851 GAA 41853
|||
Sbjct 43375 GAA 43377
>seq75
Length=1151455
Score = 96.9 bits (106), Expect = 3e-15
Identities = 152/214 (71%), Gaps = 4/214 (2%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| ||| || ||||||||||||||||||||||| || || || || || | ||
Sbjct 638726 AACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCATCT 638785
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| |||||||| || || || || || ||||| || || | |||| | ||||| ||
Sbjct 638786 TCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTTATCT 638845
Query 41771 ATGATTTTTTGC-TTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828
|| |||||| || ||| | | |||||| ||| || || | || || |
Sbjct 638846 TGGA--TTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGATAG 638903
Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||| || ||||| || || ||||| ||||||||
Sbjct 638904 TTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937
>seq49
Length=1984306
Score = 93.3 bits (102), Expect = 4e-14
Identities = 101/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || || ||| || |||||||| ||||||||
Sbjct 95357 CCACCACGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAA 95416
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || | || |||||||| ||||||||||| |||||||| || ||||| | |||
Sbjct 95417 AGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGG 95476
Query 41756 ACGCTCTCCTTGTC 41769
| | ||| |||||
Sbjct 95477 ATTCCCTCTTTGTC 95490
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462303375889600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |