Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emergomyces_20orientalis_20[genbank_20GCA_5F002110485.1_202017-04- 25] 108 sequences; 35,498,521 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq103 122 8e-23 seq75 96.9 3e-15 seq49 93.3 4e-14 >seq103 Length=249856 Score = 122 bits (134), Expect = 8e-23 Identities = 138/183 (75%), Gaps = 4/183 (2%) Strand=Plus/Plus Query 41673 CCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATA 41732 |||||||||||||||| ||| || || || |||| || ||||||||||||||||| | Sbjct 43197 CCTTCTGAATGTTATAATCGCTAAGCGTCCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGA 43256 Query 41733 TCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGA 41790 ||| ||||| ||||| | || | || |||||||||| |||||| ||| || | Sbjct 43257 TCAATCGCTGCTGGTCGGGTGGGATGCCCTCCTTGTCCTGGATTTTACTCTTGACATTGT 43316 Query 41791 CGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTAC 41850 || | ||||||||| ||||| ||||| | || || || || ||||| || ||||| || Sbjct 43317 CG--ATAGTGTCGCTGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTTAGGGTCTTGAC 43374 Query 41851 GAA 41853 ||| Sbjct 43375 GAA 43377 >seq75 Length=1151455 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| ||| || ||||||||||||||||||||||| || || || || || | || Sbjct 638726 AACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTATAATCAGAAAGCGTCCGGCCATCT 638785 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || |||||||| || || || || || ||||| || || | |||| | ||||| || Sbjct 638786 TCTAGCTGCTTACCAGCAAAGATGAGACGCTGCTGATCTGGTGGAATCCCTTCCTTATCT 638845 Query 41771 ATGATTTTTTGC-TTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCG 41828 || |||||| || ||| | | |||||| ||| || || | || || | Sbjct 638846 TGGA--TTTTGCTTTTTACGTTATCAATTGTGTCGGAGCTCTCGACTTCAAGTGTGATAG 638903 Query 41829 TTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||| || ||||| || || ||||| |||||||| Sbjct 638904 TTTTGCCGGTCAGAGTTTTCACGAAGATCTGCAT 638937 >seq49 Length=1984306 Score = 93.3 bits (102), Expect = 4e-14 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||| || |||||||| |||||||| Sbjct 95357 CCACCACGCAGACGCAGGACGAGGTGAAGGGTCGACTCTTTTTGAATGTTGTAGTCGGAA 95416 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || |||||||| ||||||||||| |||||||| || ||||| | ||| Sbjct 95417 AGGGTACGGCCATCCTCGAGCTGTTTGCCGGCGAAGATCAGGCGTTGCTGGTCGGGGGGG 95476 Query 41756 ACGCTCTCCTTGTC 41769 | | ||| ||||| Sbjct 95477 ATTCCCTCTTTGTC 95490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303375889600