Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq302 132 1e-25
>seq302
Length=30871
Score = 132 bits (146), Expect = 1e-25
Identities = 191/266 (72%), Gaps = 4/266 (2%)
Strand=Plus/Minus
Query 230386 ATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTCCATGTCGC 230445
||||| || ||||| || | ||| |||||||| | | || || | ||| |||||
Sbjct 11431 ATCATCACTGAAGCTGTCACTATCGAGCAGGAGTTCCTCTCAGATGCGCTCCCA-GTCGC 11373
Query 230446 -CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCAT 230504
||| | || |||||||| | || ||| | || ||||| || ||||| || || ||| |
Sbjct 11372 GCTTCTCGGAATGAACGCCAAGCTCATGTGCCAATACATTGAGTTCGTCGCTGATCGCCT 11313
Query 230505 TTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGA 230564
| ||||| | || || ||||||| |||||||| | ||||| |||| || |||||
Sbjct 11312 CCTCGTTGCTTTGGGCAACAAGAAAGTCTACAACTCCACCAACCCATTTGACTTCATGGA 11253
Query 230565 GCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAG 230624
||| || || ||| || ||||||||||||||||| ||||| ||||||| ||||
Sbjct 11252 TAACATCTCCCTGGCAGGTAAAACCAACTTCTTCGAAAAACGTGTTGGTGACTACCAGAA 11193
Query 230625 GCCTGGTGTGATG--AAGCCCGAAGA 230648
| | ||||| ||| |||| | ||||
Sbjct 11192 GGCCGGTGTCATGGCAAGCACCAAGA 11167
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057763768823720
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |