Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq302 93.3 4e-14
>seq302
Length=30871
Score = 93.3 bits (102), Expect = 4e-14
Identities = 117/161 (73%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293
|| || || |||||||| ||| ||| | || ||||| ||||||||||| |||||
Sbjct 11809 ATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCTGAGTGAATGTTCTCCATCATGATCTGG 11868
Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353
|| ||||| ||||| || || || | | ||||| ||| || ||| || || | ||
Sbjct 11869 AAGCCGTAGAAGCAACGAGCCTCGGGAACCTGAACCTCCCCGCTGAAACGCTCAACCAGG 11928
Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAA 17394
|||||||| || ||||| || ||||||||| || |||||
Sbjct 11929 TTTTCGTTGACAATGCCATCCGACGCGGCGAAGAATGCCAA 11969
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517516850341920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |