Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq302 93.3 4e-14 >seq302 Length=30871 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || |||||||| ||| ||| | || ||||| ||||||||||| ||||| Sbjct 11809 ATGTAGGTGTCGATGAGGAGGGAGTAGGTCTCTGAGTGAATGTTCTCCATCATGATCTGG 11868 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| ||||| || || || | | ||||| ||| || ||| || || | || Sbjct 11869 AAGCCGTAGAAGCAACGAGCCTCGGGAACCTGAACCTCCCCGCTGAAACGCTCAACCAGG 11928 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAA 17394 |||||||| || ||||| || ||||||||| || ||||| Sbjct 11929 TTTTCGTTGACAATGCCATCCGACGCGGCGAAGAATGCCAA 11969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517516850341920