Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq158 96.9 4e-15
>seq158
Length=31743
Score = 96.9 bits (106), Expect = 4e-15
Identities = 267/404 (66%), Gaps = 14/404 (3%)
Strand=Plus/Plus
Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928
||||| ||||| ||| | | || || ||||||| ||||| || || |||||
Sbjct 10017 ACGTAAAACTGCGCAAAC-ATATGACAAGGCGGCAACGCCATTTTCTTCAAATCTGCCGG 10075
Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988
|||||| || | |||| | || || | |||||| ||||| || || || |
Sbjct 10076 GTTCCACGCACTTAGGATAATCCGTCTATCATACGGGTTCTCCTTGAGCTTCCGTACTAC 10135
Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048
||| | ||| |||||||||| || ||||||||||| ||| || ||||| | ||
Sbjct 10136 CTCCGCAATCTGATCCACGCCCTTTCCTGAGTAATCTGTCTGGGAATCGACGTATTCTGC 10195
Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108
|| || || | ||| |||||||| || ||||| || ||||| || ||| ||||
Sbjct 10196 GCCAAAATGACGCCATTGGAACCCATAAACGGGGCCTAGGTCGCCCACGGCCCGGTGCGA 10255
Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--C 146166
||| || | | | || | |||||| |||||| | ||||| ||||||| ||| |
Sbjct 10256 CAGACCTACGGAGTCAAGATATTCCCGGCTGCCGTTGCCATCCCAAATCTTGATGCCAGC 10315
Query 146167 CTCGCGGAGAGCTCATTGGAGTCCG--TGGACCCCCTG--ATGAACCAGAGCAGCTCTTC 146222
|||| ||| | |||| | || | |||| ||||||||||| || || |
Sbjct 10316 TTCGCTGAGGG------GGAGAGAGGATGTGCTGCCTGATATGAACCAGAGAAGTTCGGC 10369
Query 146223 GAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266
|| ||| | | |||||| | |||||| || || || ||||
Sbjct 10370 GACGACTGCACGGAGGAAGACGCGCTTGGTAGTTAGGAGAGGGA 10413
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590044021233760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |