Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq158 96.9 4e-15 >seq158 Length=31743 Score = 96.9 bits (106), Expect = 4e-15 Identities = 267/404 (66%), Gaps = 14/404 (3%) Strand=Plus/Plus Query 145870 ACGTAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGG 145928 ||||| ||||| ||| | | || || ||||||| ||||| || || ||||| Sbjct 10017 ACGTAAAACTGCGCAAAC-ATATGACAAGGCGGCAACGCCATTTTCTTCAAATCTGCCGG 10075 Query 145929 GTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATCAG 145988 |||||| || | |||| | || || | |||||| ||||| || || || | Sbjct 10076 GTTCCACGCACTTAGGATAATCCGTCTATCATACGGGTTCTCCTTGAGCTTCCGTACTAC 10135 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 ||| | ||| |||||||||| || ||||||||||| ||| || ||||| | || Sbjct 10136 CTCCGCAATCTGATCCACGCCCTTTCCTGAGTAATCTGTCTGGGAATCGACGTATTCTGC 10195 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCC 146108 || || || | ||| |||||||| || ||||| || ||||| || ||| |||| Sbjct 10196 GCCAAAATGACGCCATTGGAACCCATAAACGGGGCCTAGGTCGCCCACGGCCCGGTGCGA 10255 Query 146109 CAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--C 146166 ||| || | | | || | |||||| |||||| | ||||| ||||||| ||| | Sbjct 10256 CAGACCTACGGAGTCAAGATATTCCCGGCTGCCGTTGCCATCCCAAATCTTGATGCCAGC 10315 Query 146167 CTCGCGGAGAGCTCATTGGAGTCCG--TGGACCCCCTG--ATGAACCAGAGCAGCTCTTC 146222 |||| ||| | |||| | || | |||| ||||||||||| || || | Sbjct 10316 TTCGCTGAGGG------GGAGAGAGGATGTGCTGCCTGATATGAACCAGAGAAGTTCGGC 10369 Query 146223 GAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAGCAGGGGGA 146266 || ||| | | |||||| | |||||| || || || |||| Sbjct 10370 GACGACTGCACGGAGGAAGACGCGCTTGGTAGTTAGGAGAGGGA 10413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590044021233760