Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq134 89.7 1e-12
>seq134
Length=7744
Score = 89.7 bits (98), Expect = 1e-12
Identities = 180/267 (67%), Gaps = 0/267 (0%)
Strand=Plus/Minus
Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833
|||| || || || | || ||||||||||| || || | || ||| | ||
Sbjct 4816 TGAATGTTGAGACCAATACCACCAGCAGTCTTTGAAATCAAGGCACAAGTCTTCAACGTG 4757
Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893
|| |||||||||||||| || || || | | | | | |||||||||||| | | ||
Sbjct 4756 TCGTAAATACCCTCAATACTGTCCTCCTTCATGTCGATAAGGAAGCACGAAGCCATCTGA 4697
Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953
||| || || ||| || || || || |||||||| || || | | |||
Sbjct 4696 GGTTGCGGGGTACCGGCATTGAAAAGGGTAGGAGAAGCATGCGTGAAGAATTTTTGAGAC 4637
Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACA 95013
||||| | ||| ||||| ||||| | | || ||| ||||| |||||||| |||
Sbjct 4636 ATGAGGTTATAGGTTTCGATGACCTTCTCTACATCATCTCCATGAATTCCGACAGCAACA 4577
Query 95014 CGCATAATCATGTCCTGAGGGCGCTCA 95040
||||| ||||||| |||||||| |||
Sbjct 4576 CGCATGATCATGTGTTGAGGGCGTTCA 4550
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989527654324020
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |