Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq819 118 2e-21
>seq819
Length=4427
Score = 118 bits (130), Expect = 2e-21
Identities = 150/204 (74%), Gaps = 2/204 (1%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | || |||||||| || || ||||| || || | || | || ||
Sbjct 1792 AAGGACAAGATGGAGCGTTGATTCTTTTTGGATGTTATAATCCGACAAGGTGCGGCCATC 1733
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| || || |||||||| || || || | || ||||| || || || |||||||||||
Sbjct 1732 TTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGATCCGGGGGGATCCCTTCTTTATC 1673
Query 104467 CTGAATCTTTGCT-TTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAG 104525
||| || |||||| || || || || | |||||| || ||| ||||| | || || |
Sbjct 1672 CTGGAT-TTTGCTCTTCACGTTGTCGATGGTATCTGAAGATTCCACCTCCAAGGTGATGG 1614
Query 104526 TCTTACCAGTAAGTGTTTTTACAA 104549
|||| ||||| || ||||| ||||
Sbjct 1613 TCTTGCCAGTGAGGGTTTTCACAA 1590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151332840814352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |