Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq4046 84.2 3e-11 >seq4046 Length=39127 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/161 (71%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 19343 AGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGC 19402 ||| || | ||||| ||| |||| || || ||||| |||||| | | |||||| || Sbjct 6241 AGAACTACAAAAATTCCTCAAATCGGAGACAAGTTCGCTTCTCGTCACGGTCAAAAGGGT 6182 Query 19403 ACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCG 19462 || ||| || | ||||| |||||||||||||| || ||| || || || || || Sbjct 6181 ACTATTGGCATTACATATCGACAAGAAGATATGCCCTTCACTCGCGAGGGCATTGTTCCA 6122 Query 19463 GATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503 ||||| || || || || || || |||| ||||||||| Sbjct 6121 GATCTGATCATCAATCCCCACGCCATTCCTTCTCGAATGAC 6081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595838899310400