Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq4046 84.2 3e-11
>seq4046
Length=39127
Score = 84.2 bits (92), Expect = 3e-11
Identities = 115/161 (71%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 19343 AGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGC 19402
||| || | ||||| ||| |||| || || ||||| |||||| | | |||||| ||
Sbjct 6241 AGAACTACAAAAATTCCTCAAATCGGAGACAAGTTCGCTTCTCGTCACGGTCAAAAGGGT 6182
Query 19403 ACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCG 19462
|| ||| || | ||||| |||||||||||||| || ||| || || || || ||
Sbjct 6181 ACTATTGGCATTACATATCGACAAGAAGATATGCCCTTCACTCGCGAGGGCATTGTTCCA 6122
Query 19463 GATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
||||| || || || || || || |||| |||||||||
Sbjct 6121 GATCTGATCATCAATCCCCACGCCATTCCTTCTCGAATGAC 6081
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595838899310400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |