Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq465 100 4e-17
>seq465
Length=5923
Score = 100 bits (110), Expect = 4e-17
Identities = 85/102 (83%), Gaps = 2/102 (2%)
Strand=Plus/Minus
Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490
||| || || ||||||| |||| || || ||||||||||| || ||||| ||||| || |
Sbjct 4387 CGCAAAACGCCATCGCAAGATC-CTCCGCGATAACATCCAGGGCATCACTAAGCCTGCCA 4329
Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
|||| |||||||| |||||||| || ||||||||| ||||||
Sbjct 4328 TCCGCCGTCTGGCCCGTCGTGGCGGTGTCAAGCGTATCTCTG 4287
Score = 80.6 bits (88), Expect = 4e-11
Identities = 114/158 (72%), Gaps = 2/158 (1%)
Strand=Plus/Minus
Query 16536 TGGTCTATGAAGAGATTCGTGATGTTTTGAAGATC-TTCCTCAAGACCGTTATCCATGAT 16594
|| |||| ||||||| |||| || |||| ||| ||||| | |||| || | |||
Sbjct 4172 TGATCTACGAAGAGACCCGTGGCGTGCTGAA-ATCGTTCCTTGAATCCGTCATTCGCGAT 4114
Query 16595 GCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTAT 16654
|| || ||||||||||| || || || ||||||||||| || ||||| | || |||
Sbjct 4113 GCGGTCACTTATACCGAGCATGCGAAGCGCAAGACTGTCACTTCGCTGGATGTGGTGTAT 4054
Query 16655 GCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|| ||||| | || || || | ||||||| |||||
Sbjct 4053 GCGTTGAAGAGACAGGGACGGACACTTTATGGGTTTGG 4016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79071136819692
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |