Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq819 86.0 6e-12
>seq819
Length=4427
Score = 86.0 bits (94), Expect = 6e-12
Identities = 140/202 (69%), Gaps = 0/202 (0%)
Strand=Plus/Plus
Query 26779 TTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCG 26838
|||| ||||| | ||||| || | |||||| | || | ||||| || |||||||
Sbjct 1590 TTGTGAAAACCCTCACTGGCAAGACCATCACCTTGGAGGTGGAATCTTCAGATACCATCG 1649
Query 26839 AGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCA 26898
| | || || || || || ||||||||||| || || ||||| ||| | || |
Sbjct 1650 ACAACGTGAAGAGCAAAATCCAGGATAAAGAAGGGATCCCCCCGGATCAGCAACGTCTGA 1709
Query 26899 TTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAG 26958
| | || || || || |||||||||| | | | | || |||||||| |||||||
Sbjct 1710 TCTTCGCTGGAAAGCAGCTCGAAGATGGCCGCACCTTGTCGGATTATAACATCCAAAAAG 1769
Query 26959 AATCTACTATCCATCTGGTCCT 26980
|||| || ||||||| |||||
Sbjct 1770 AATCAACGCTCCATCTTGTCCT 1791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478635810303680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |