Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_009899.1
Length=344691
Score E
Sequences producing significant alignments: (Bits) Value
seq302 111 3e-19
>seq302
Length=30871
Score = 111 bits (122), Expect = 3e-19
Identities = 178/253 (70%), Gaps = 2/253 (1%)
Strand=Plus/Minus
Query 243502 ATCATCACAGAAGCAGTTGAAAACGAAAAGGAATTCATTTGCGACGCTATTCCATGCCGG 243561
|||||||| ||||| || | ||| |||| ||| | | || || | ||| | |
Sbjct 11431 ATCATCACTGAAGCTGTCACTATCGAGCAGGAGTTCCTCTCAGATGCGCTCCCAGTCGCG 11372
Query 243562 CTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 243621
||| | || |||||| | | |||||| | || ||||| || ||||| || || ||| |
Sbjct 11371 CTTCTCGGAATGAACGCCAAGCTCATGTGCCAATACATTGAGTTCGTCGCTGATCGCCTC 11312
Query 243622 TTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAG 243681
|| | || | || | ||||||| |||||||||| ||||| |||| ||| |||||
Sbjct 11311 CTCGTTGCTTTGGGCAACAAGAAAGTCTACAACTCCACCAACCCATTTGACTTCATGGAT 11252
Query 243682 CTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA-ACG 243740
||| || || ||| ||||| |||||||||||||| ||||| |||| || || | |
Sbjct 11251 AACATCTCCCTGGCAGGTAAAACCAACTTCTTCGAAAAACGTGTTGGTGACTACCAGAAG 11192
Query 243741 CCCTGGTGTGATG 243753
|| ||||| |||
Sbjct 11191 GCC-GGTGTCATG 11180
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1102817203391400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |