Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq134 150 2e-31
>seq134
Length=7744
Score = 150 bits (166), Expect = 2e-31
Identities = 311/460 (68%), Gaps = 2/460 (0%)
Strand=Plus/Plus
Query 93898 CCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGAT-GAC 93956
|| ||||| ||||| || || |||||| || |||||| ||||||| ||||| || |||
Sbjct 4665 CCTACCCTTTTCAATGCCGGTACCCCGCAACCTCAGATGGCTTCGTGCTTCCTTATCGAC 4724
Query 93957 GAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTC 94016
| |||| ||| || || |||| ||||| | ||| ||||| || ||
Sbjct 4725 -ATGAAGGAGGACAGTATTGAGGGTATTTACGACACGTTGAAGACTTGTGCCTTGATTTC 4783
Query 94017 AAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACAT 94076
||| || || || || || ||| | ||| | | |||| || || || |||||
Sbjct 4784 AAAGACTGCTGGTGGTATTGGTCTCAACATTCACCGCATTCGTGGCACCGGCTCTTACAT 4843
Query 94077 CCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGC 94136
||| || ||||| |||| ||||| |||| || ||||| || || ||||||||| |
Sbjct 4844 TGCCGGAACAAATGGATCCTCAAACGGAATCGTTCCAATGCTGCGCGTTTTCAACAACAC 4903
Query 94137 GGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGA 94196
|| | || || |||||||| ||| | || ||| ||||||| | ||||||||
Sbjct 4904 TGCTAGATATGTCGACCAGGGAGGTAATAAACGGCCGGGAGCTTTCGCTATTTATCTCGA 4963
Query 94197 GCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCT 94256
|| |||||| | || | | ||| | ||||| || ||||||||||| || ||
Sbjct 4964 ACCGTGGCACACTGATATTTTCGAATTCTTGGACCTCCGTAAGAACCACGGAAAGGAAGA 5023
Query 94257 GGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGT 94316
| |||| | || || ||| ||||| ||| || || || |||||||| || ||
Sbjct 5024 AGTTCGGGCTCGTGATCTTTTCCTAGCTCTTTGGACACCTGATCTCTTTATGAAGCGTGT 5083
Query 94317 CGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAA 94356
|||||||| || |||| ||| ||||| |||||||||
Sbjct 5084 TGAGAAAAATGGCGAATGGACTCTCTTTTGCCCCAATGAA 5123
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494695718126240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |