Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq819 100 3e-16 >seq819 Length=4427 Score = 100 bits (110), Expect = 3e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || ||||| | ||| || ||||| | | |||||| |||||||||||||| Sbjct 2263 GCCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGA 2204 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | || || || || || |||||||| | | |||| || ||||| || || || || Sbjct 2203 AAGCGTTCGACCATCTTCTAGCTGTTTACCAGCAAAGATAAGTCGCTGCTGATCTGGTGG 2144 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || ||||| ||||| |||||| ||||| | || | ||||| | ||| || Sbjct 2143 GATCCCTTCCTTGTCTTGGATTTTGCTTTTTACGTTGTCAATTGTGTCAGAGCTCTCGAC 2084 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||||| |||||||||||||| || || |||||||| Sbjct 2083 CTCCAGTGTGATGGTTTTGCCAGTCAGAGTTTTCACGAAGATCTGCAT 2036 Score = 82.4 bits (90), Expect = 8e-11 Identities = 110/152 (72%), Gaps = 1/152 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| || || | | | |||||||| || || ||||| ||| | Sbjct 1472 CCTCCACGGAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGGATATTGTAATCGGAC 1413 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| |||||| || || || |||| |||| || ||||||||||| ||||| Sbjct 1412 AGGGTACGACCGTCCTCAAGCTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCAGGAGGG 1353 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 ||||| || ||||| ||| |||| | |||| Sbjct 1352 ATACCCTCCTTGTC-TTGAATTTTGGACTTAA 1322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496234832623680