Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq3947 98.7 1e-15 >seq3947 Length=14563 Score = 98.7 bits (108), Expect = 1e-15 Identities = 197/292 (67%), Gaps = 19/292 (7%) Strand=Plus/Minus Query 9195 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9254 ||||| || || || || || || || | ||||||||||||||| |||||||| | || Sbjct 7384 TCAAATCGGCCAGGTCGCAGCAGGGCCTTATCAAGGATATCAACCCGATTCGTTCCAGCC 7325 Query 9255 ATGACAACAATACCTGTTTC--ATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9312 | |||||| | | |||| | | | || || ||||| || || | || || || | Sbjct 7324 AGGACAACGA--CTTGTTCAGAAGTGTTGAAGCCGTCCATTTCCGTGAGAATCTGATTCA 7267 Query 9313 TAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC---------T 9363 || |||||| || || || | ||||||| | | || | | Sbjct 7266 GCGTGCTTTCCCGCTCGTCGTTTCC------ACCACCATAAGCGTTTTTCGATCTCGATT 7213 Query 9364 TTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTT 9423 |||| | |||||||||||||| ||||| | |||||| ||| |||| |||||| || Sbjct 7212 TTCCAATAGCATCAATCTCATCGATGAATATAATACAGGGTGTGTTTTTGCGGGCTGTTG 7153 Query 9424 CAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475 |||| ||||| ||||| | || || |||||||||||||| ||||| || Sbjct 7152 CAAATAGATCACGAACTCGGGAGGGTCCAACACCAACAAACATTTCCACGAA 7101 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589948026566560