Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_014789.1
Length=184409
Score E
Sequences producing significant alignments: (Bits) Value
seq3947 98.7 1e-15
>seq3947
Length=14563
Score = 98.7 bits (108), Expect = 1e-15
Identities = 197/292 (67%), Gaps = 19/292 (7%)
Strand=Plus/Minus
Query 9195 TCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCG 9254
||||| || || || || || || || | ||||||||||||||| |||||||| | ||
Sbjct 7384 TCAAATCGGCCAGGTCGCAGCAGGGCCTTATCAAGGATATCAACCCGATTCGTTCCAGCC 7325
Query 9255 ATGACAACAATACCTGTTTC--ATTATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAA 9312
| |||||| | | |||| | | | || || ||||| || || | || || || |
Sbjct 7324 AGGACAACGA--CTTGTTCAGAAGTGTTGAAGCCGTCCATTTCCGTGAGAATCTGATTCA 7267
Query 9313 TAGTTTGTTCCCGTTCATCATTCGCTGGCATACCACCAGCACTGCGTTGC---------T 9363
|| |||||| || || || | ||||||| | | || | |
Sbjct 7266 GCGTGCTTTCCCGCTCGTCGTTTCC------ACCACCATAAGCGTTTTTCGATCTCGATT 7213
Query 9364 TTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATTT 9423
|||| | |||||||||||||| ||||| | |||||| ||| |||| |||||| ||
Sbjct 7212 TTCCAATAGCATCAATCTCATCGATGAATATAATACAGGGTGTGTTTTTGCGGGCTGTTG 7153
Query 9424 CAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAA 9475
|||| ||||| ||||| | || || |||||||||||||| ||||| ||
Sbjct 7152 CAAATAGATCACGAACTCGGGAGGGTCCAACACCAACAAACATTTCCACGAA 7101
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 589948026566560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |