Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq819 179 8e-40
seq134 84.2 5e-11
>seq819
Length=4427
Score = 179 bits (198), Expect = 8e-40
Identities = 165/209 (79%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| ||||| |||||||| |||||||| |||| ||||||| || || ||
Sbjct 2016 ACAAGGTGAAGTGTGGATTCTTTTTGGATATTGTAGTCGGAGAGAGTTCGGCCGTCCTCA 1957
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || |||||||||||||||||||| |||||||| || || || ||||| |||||
Sbjct 1956 AGCTGTTTTCCTGCGAAGATAAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTATCTTGG 1897
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
||||| || ||||| || ||||| || || ||||| |||||||| |||| || ||
Sbjct 1896 ATTTTGCTTTTAACGTTGTCGATGGTATCTGAGCTTTCGACTTCAAGAGTAATAGTTTTG 1837
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || |||||||| | |||||
Sbjct 1836 CCGGTAAGGGTCTTTACGAAGATCTGCAT 1808
Score = 150 bits (166), Expect = 4e-31
Identities = 163/216 (75%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 194925 TCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCC 194984
|||||| || | || |||||| ||| || ||||| ||||| || | ||| |||| ||
Sbjct 2251 TCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGCGTTCGACC 2192
Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044
|||||| ||||| ||||| || ||||||||||| || || ||||| || || ||||| ||
Sbjct 2191 ATCTTCTAGCTGTTTACCAGCAAAGATAAGTCGCTGCTGATCTGGTGGGATCCCTTCCTT 2132
Query 195045 GTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAAC 195104
|||||| ||||| || ||||| ||||| ||||| || || || || || || || |
Sbjct 2131 GTCTTGGATTTTGCTTTTTACGTTGTCAATTGTGTCAGAGCTCTCGACCTCCAGTGTGAT 2072
Query 195105 CGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || || |||| |||||| ||||| | |||||
Sbjct 2071 GGTTTTGCCAGTCAGAGTTTTCACGAAGATCTGCAT 2036
Score = 129 bits (142), Expect = 1e-24
Identities = 149/198 (75%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTC 194990
||||| || || || || |||||||| || || ||||| | |||| || | ||||||||
Sbjct 1788 ACAAGATGGAGCGTTGATTCTTTTTGGATGTTATAATCCGACAAG-GTGCGGCCATCTTC 1730
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
||||||||| || |||||||| || ||||| || || || || || |||||||| || ||
Sbjct 1729 GAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGATCCGGGGGGATCCCTTCTTTATCCTG 1670
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
||||| ||| ||||| || ||||| || ||| |||||| || | ||| | |||||
Sbjct 1669 GATTTTGCTCTTCACGTTGTCGATGGTATCTGAAGATTCCACCTCCAAGGTGATGGTCTT 1610
Query 195111 TCCTGTCAAAGTTTTTAC 195128
|| || | ||||| ||
Sbjct 1609 GCCAGTGAGGGTTTTCAC 1592
Score = 111 bits (122), Expect = 3e-19
Identities = 100/126 (79%), Gaps = 0/126 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||| | ||| || || ||||| || || ||||||||||||| || || | || || ||
Sbjct 1455 AACCAAGTGGAGGGTAGACTCCTTCTGGATATTGTAATCGGACAGGGTACGACCGTCCTC 1396
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|||||||| || ||||||||||| || |||||||| ||||| || || || ||||||||
Sbjct 1395 AAGCTGCTTGCCGGCGAAGATAAGGCGCTGTTGGTCAGGAGGGATACCCTCCTTGTCTTG 1336
Query 195051 AATTTT 195056
||||||
Sbjct 1335 AATTTT 1330
>seq134
Length=7744
Score = 84.2 bits (92), Expect = 5e-11
Identities = 91/121 (75%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 160601 TGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGGAGCCTTTTCTGT 160660
||||| | ||||| || |||||| | || | | ||||| || |||| || || ||
Sbjct 5055 TGGACACCTGATCTCTTTATGAAGCGTGTTGAGAAAAATGGCGAATGGACTCTCTTTTGC 5114
Query 160661 CCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAGACTCTTTATGAA 160720
|||||||||||||| || | | ||||| |||||| ||||||| ||| ||||||| |||
Sbjct 5115 CCCAATGAAGCGCCAGGCTTGGCGGATGTCTATGGTGCCGAGTTTGAGGCTCTTTACGAA 5174
Query 160721 A 160721
|
Sbjct 5175 A 5175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109418427504548
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |