Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_016072.1
Length=1259197
Score E
Sequences producing significant alignments: (Bits) Value
seq819 114 1e-19
seq179 109 4e-18
>seq819
Length=4427
Score = 114 bits (126), Expect = 1e-19
Identities = 159/220 (72%), Gaps = 2/220 (1%)
Strand=Plus/Minus
Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316
|| || || ||||| ||||| || |||||| |||||||| || | |||||||
Sbjct 2025 AGGCGAAGGACAAGGTGAAGTGTGGATTCTTTTTGGATATTGTAGTCGGAGAGAGTTCGG 1966
Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376
|| ||||| |||||||| || || ||||||| |||||| || || || || || |||
Sbjct 1965 CCGTCCTCAAGCTGTTTTCCTGCGAAGATAAGTCGTTGCTGGTCTGGTGGGATACCCTCT 1906
Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTG-TGAGTACATTCGAGAGT 563435
|||||||| ||||| ||| || || || ||||| | | | || ||| |||||
Sbjct 1905 TTATCTTGGATTTTGCTTTTAACGTTGTCGATGGTATCTGAGCTTTCGAC-TTCAAGAGT 1847
Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475
|| |||||| || ||||| || || ||||| || ||||||
Sbjct 1846 AATAGTTTTGCCGGTAAGGGTCTTTACGAAGATCTGCATA 1807
>seq179
Length=7536
Score = 109 bits (120), Expect = 4e-18
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468
||||| || || || || ||||| || |||||||||||||| || |||||||| | ||
Sbjct 1343 ACTGTCCCCGCCTACTTCAATGATTCTCAACGTCAAGCTACCAAGGATGCTGGTCAGATC 1402
Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528
||||| ||||| || || ||| || ||||||| || ||||||||||| ||||| || ||
Sbjct 1403 GCTGGTCTTAACGTGCTACGTGTTGTCAATGAGCCAACTGCTGCTGCTCTTGCCTACGGT 1462
Query 550529 CTTGA 550533
|| ||
Sbjct 1463 CTCGA 1467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 4029060981237560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |