Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq819 127 2e-24
>seq819
Length=4427
Score = 127 bits (140), Expect = 2e-24
Identities = 150/203 (74%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 101267 TGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTGC 101326
||||| || ||||||||||| |||||||| |||| || ||||| | | || || | ||
Sbjct 2010 TGAAGTGTGGATTCTTTTTGGATATTGTAGTCGGAGAGAGTTCGGCCGTCCTCAAGCTGT 1951
Query 101327 TTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTT 101386
|| ||||| || || | || || || || || || || || ||||||||||| |||||
Sbjct 1950 TTTCCTGCGAAGATAAGTCGTTGCTGGTCTGGTGGGATACCCTCTTTATCTTGGATTTTG 1891
Query 101387 TGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTT 101446
||| || | || | || || || |||| ||||||||||| | |||||||||||
Sbjct 1890 CTTTTAACGTTGTCGATGGTATCTGAGCTTTCGACTTCAAGAGTAATAGTTTTGCCGGTA 1831
Query 101447 AAAGTTTTTACAAATATCTGCAT 101469
| || ||||| || ||||||||
Sbjct 1830 AGGGTCTTTACGAAGATCTGCAT 1808
Score = 89.7 bits (98), Expect = 4e-13
Identities = 136/194 (70%), Gaps = 0/194 (0%)
Strand=Plus/Minus
Query 101266 ATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCCAATTG 101325
||| || || ||||||||||| || || ||||| | | || | | |||| || | ||
Sbjct 1783 ATGGAGCGTTGATTCTTTTTGGATGTTATAATCCGACAAGGTGCGGCCATCTTCGAGCTG 1724
Query 101326 CTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTT 101385
||| || || || |||| ||| || ||||| || || || ||||||||||| || |||||
Sbjct 1723 CTTTCCAGCGAAGATCAGACGTTGCTGATCCGGGGGGATCCCTTCTTTATCCTGGATTTT 1664
Query 101386 TTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGT 101445
|| || | || | || || || | |||||| || | |||| || ||||| ||
Sbjct 1663 GCTCTTCACGTTGTCGATGGTATCTGAAGATTCCACCTCCAAGGTGATGGTCTTGCCAGT 1604
Query 101446 TAAAGTTTTTACAA 101459
| ||||| ||||
Sbjct 1603 GAGGGTTTTCACAA 1590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396256937066508
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |