Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_018853.1
Length=40474
Score E
Sequences producing significant alignments: (Bits) Value
seq3890 93.3 1e-14
>seq3890
Length=67644
Score = 93.3 bits (102), Expect = 1e-14
Identities = 162/233 (70%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 16364 GTTCCCCGGAGCGGCTTTCTTCAAGCGTGAGCCGAAGT-CGGCGATCGTTACGGCCATGG 16422
||||||||| || | | ||| | || |||| ||| | || ||| | || || ||||
Sbjct 11867 GTTCCCCGGCGCCTCGTGGTTCCATCGCAAGCCAAAGAGCAGC-ATCATCACTGCGATGG 11925
Query 16423 GTAAGCGGCTGGTCGCCGTTGGGTGCTCCGCTTACAAGTCGGGTCCGGGTCCCCAGTGGA 16482
||||| | |||| || | || ||| ||| || ||| || || || ||||||||||
Sbjct 11926 GTAAGAGATTGGTTGCGGAGGGTTGCAGCGCATATAAGGAAGGGCCAGGCCCCCAGTGGA 11985
Query 16483 CCGACGCCGACCGTGCGTCGTACGCGAAGTGGCAGCGGAAGCGCGGGTACTCCGGCGCGG 16542
| || || |||||||| |||||| ||||||||||| ||| || | | ||| ||
Sbjct 11986 CTGATGCGGACCGTGCATCGTACAAGAAGTGGCAGCAGAAATTAGGATTCAGCGGTAAGG 12045
Query 16543 ACGCTGACGGCTGGCCGGGTAAGGCGTCTTGGGACGCGCTGAAGGTCCCGAAG 16595
| || || || ||||| || ||| | |||||| |||||||| | ||||
Sbjct 12046 ATGCCGATGGGTGGCCCGGGAAGACAAGTTGGGATAAACTGAAGGTTCGGAAG 12098
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 129388371491808
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |