Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_018875.1
Length=119082
Score E
Sequences producing significant alignments: (Bits) Value
seq819 120 2e-22
>seq819
Length=4427
Score = 120 bits (132), Expect = 2e-22
Identities = 174/242 (72%), Gaps = 3/242 (1%)
Strand=Plus/Minus
Query 48527 GATATAGTC-GTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAA 48585
|||||| | || ||| |||| | | |||||||||||| || |||||||| || ||||
Sbjct 2276 GATATATTTAGTGGCCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAA 2217
Query 48586 TATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCT 48645
| ||||| || || || ||||| | || || | ||| ||||| ||||| || |||||||
Sbjct 2216 TGTTGTAGTCCGAAAGCGTTCGACCATCTTCTAGCTGTTTACCAGCAAAGATAAGTCGCT 2157
Query 48646 GTTGATC-CGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGAC 48704
| ||||| |||||| | || |||||||| || || |||||| | | |
Sbjct 2156 GCTGATCTGGTGGGATC-CCTTCCTTGTCTTGGATTTTGCTTTTTACGTTGTCAATTGTG 2098
Query 48705 TCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGC 48764
|| || ||| ||||||| || || ||||| || |||| |||||| || || ||||||
Sbjct 2097 TCAGAGCTCTCGACCTCCAGTGTGATGGTTTTGCCAGTCAGAGTTTTCACGAAGATCTGC 2038
Query 48765 AT 48766
||
Sbjct 2037 AT 2036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 380916967943412
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |