Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq819 120 2e-22 >seq819 Length=4427 Score = 120 bits (132), Expect = 2e-22 Identities = 174/242 (72%), Gaps = 3/242 (1%) Strand=Plus/Minus Query 48527 GATATAGTC-GTCGCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAA 48585 |||||| | || ||| |||| | | |||||||||||| || |||||||| || |||| Sbjct 2276 GATATATTTAGTGGCCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAA 2217 Query 48586 TATTGTAATCAGATAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCT 48645 | ||||| || || || ||||| | || || | ||| ||||| ||||| || ||||||| Sbjct 2216 TGTTGTAGTCCGAAAGCGTTCGACCATCTTCTAGCTGTTTACCAGCAAAGATAAGTCGCT 2157 Query 48646 GTTGATC-CGTGGGAACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGAC 48704 | ||||| |||||| | || |||||||| || || |||||| | | | Sbjct 2156 GCTGATCTGGTGGGATC-CCTTCCTTGTCTTGGATTTTGCTTTTTACGTTGTCAATTGTG 2098 Query 48705 TCTGACGCCTCCACCTCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGC 48764 || || ||| ||||||| || || ||||| || |||| |||||| || || |||||| Sbjct 2097 TCAGAGCTCTCGACCTCCAGTGTGATGGTTTTGCCAGTCAGAGTTTTCACGAAGATCTGC 2038 Query 48765 AT 48766 || Sbjct 2037 AT 2036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380916967943412