Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_019414.1
Length=51071
Score E
Sequences producing significant alignments: (Bits) Value
seq3890 84.2 7e-12
>seq3890
Length=67644
Score = 84.2 bits (92), Expect = 7e-12
Identities = 152/220 (69%), Gaps = 2/220 (1%)
Strand=Plus/Plus
Query 22711 TTCCCCGGCGCCTCGTTCTTCAAGCGCGCGCCGAAG-TCGGCGATCGTCACGGCCATGGG 22769
|||||||||||||||| ||| | ||| ||| ||| | || ||| |||| || |||||
Sbjct 11868 TTCCCCGGCGCCTCGTGGTTCCATCGCAAGCCAAAGAGCAGC-ATCATCACTGCGATGGG 11926
Query 22770 CAAGCGCCTGGTGGCCGAGGGCTGCGGCGTCTACAGCTCGGGCCCCGGCCCGCAGTGGAC 22829
||| | |||| || ||||| ||| ||| || | || || ||||| ||||||||
Sbjct 11927 TAAGAGATTGGTTGCGGAGGGTTGCAGCGCATATAAGGAAGGGCCAGGCCCCCAGTGGAC 11986
Query 22830 GGAGTCCGACCGGAAGTCGTACGCGAAGTGGCAGCGCAAGCTCGGCTACACCGGGTCGGC 22889
|| | ||||| |||||| ||||||||||| || | || | || ||| ||
Sbjct 11987 TGATGCGGACCGTGCATCGTACAAGAAGTGGCAGCAGAAATTAGGATTCAGCGGTAAGGA 12046
Query 22890 TGCGGACGGATACCCCGGCAAGGCGTCGTGGGACAAGCTG 22929
||| || || | ||||| ||| | ||||| || |||
Sbjct 12047 TGCCGATGGGTGGCCCGGGAAGACAAGTTGGGATAAACTG 12086
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 163296981955224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |