Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_019414.1 Length=51071 Score E Sequences producing significant alignments: (Bits) Value seq3890 84.2 7e-12 >seq3890 Length=67644 Score = 84.2 bits (92), Expect = 7e-12 Identities = 152/220 (69%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 22711 TTCCCCGGCGCCTCGTTCTTCAAGCGCGCGCCGAAG-TCGGCGATCGTCACGGCCATGGG 22769 |||||||||||||||| ||| | ||| ||| ||| | || ||| |||| || ||||| Sbjct 11868 TTCCCCGGCGCCTCGTGGTTCCATCGCAAGCCAAAGAGCAGC-ATCATCACTGCGATGGG 11926 Query 22770 CAAGCGCCTGGTGGCCGAGGGCTGCGGCGTCTACAGCTCGGGCCCCGGCCCGCAGTGGAC 22829 ||| | |||| || ||||| ||| ||| || | || || ||||| |||||||| Sbjct 11927 TAAGAGATTGGTTGCGGAGGGTTGCAGCGCATATAAGGAAGGGCCAGGCCCCCAGTGGAC 11986 Query 22830 GGAGTCCGACCGGAAGTCGTACGCGAAGTGGCAGCGCAAGCTCGGCTACACCGGGTCGGC 22889 || | ||||| |||||| ||||||||||| || | || | || ||| || Sbjct 11987 TGATGCGGACCGTGCATCGTACAAGAAGTGGCAGCAGAAATTAGGATTCAGCGGTAAGGA 12046 Query 22890 TGCGGACGGATACCCCGGCAAGGCGTCGTGGGACAAGCTG 22929 ||| || || | ||||| ||| | ||||| || ||| Sbjct 12047 TGCCGATGGGTGGCCCGGGAAGACAAGTTGGGATAAACTG 12086 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163296981955224