Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_020104.1
Length=1021348
Score E
Sequences producing significant alignments: (Bits) Value
seq819 102 5e-16
seq179 95.1 8e-14
>seq819
Length=4427
Score = 102 bits (112), Expect = 5e-16
Identities = 154/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610
|||||| || || ||||| |||||||| |||||| | ||| || || | |||||
Sbjct 2029 ACGAAGGCGAAGGACAAGGTGAAGTGTGGATTCTTTTTGGATATTGTAGTCGGAGAGAGT 1970
Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670
|| | || ||||| || ||||| || || ||||| ||||| || || || || || ||
Sbjct 1969 TCGGCCGTCCTCAAGCTGTTTTCCTGCGAAGATAAGTCGTTGCTGGTCTGGTGGGATACC 1910
Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730
|| || ||||| || || ||| || || || ||||| | | | ||||||
Sbjct 1909 CTCTTTATCTTGGATTTTGCTTTTAACGTTGTCGATGGTATCTGAGCTTTCGACTTCAAG 1850
Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769
||||||||||| ||||| || ||||| ||||| || ||
Sbjct 1849 AGTAATAGTTTTGCCGGTAAGGGTCTTTACGAAGATCTG 1811
>seq179
Length=7536
Score = 95.1 bits (104), Expect = 8e-14
Identities = 96/125 (77%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 474746 ACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATT 474805
||||| || || || || |||||||||||||||||||| || || ||||| || ||
Sbjct 1343 ACTGTCCCCGCCTACTTCAATGATTCTCAACGTCAAGCTACCAAGGATGCTGGTCAGATC 1402
Query 474806 GCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865
|| |||||||| || ||||| || | ||||| ||||| || || || ||||| || |||
Sbjct 1403 GCTGGTCTTAACGTGCTACGTGTTGTCAATGAGCCAACTGCTGCTGCTCTTGCCTACGGT 1462
Query 474866 CTTGA 474870
|| ||
Sbjct 1463 CTCGA 1467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3267988575277712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |