Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq4109 96.9 4e-15
>seq4109
Length=12059
Score = 96.9 bits (106), Expect = 4e-15
Identities = 176/255 (69%), Gaps = 2/255 (1%)
Strand=Plus/Minus
Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319
||||| || | || || ||| | |||||||| || ||| ||||| |||| || ||
Sbjct 9195 AGTCCTTCAGGGCCGTGGTATACCGCATAGAAGGCACTCATGTTTGCAAGCAAAGCCTGG 9136
Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379
|| ||||||||||| || || || || || | | |||||| ||||| | ||| || ||
Sbjct 9135 GCAGTGCAGATGTTGCTAGTAGCCTTTTCGCGACGAATATGTTGCTCCCGAGTCTGAAGC 9076
Query 139380 GCTAATCTGTA-TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGG 139438
|| | | ||| || ||||| |||||| || |||||||| | ||| ||
Sbjct 9075 GCCAGAC-GTAGCGCCCTGTTGCCGAGTCTGTCCTTGGAGACGCCTACAATACGGCCGGG 9017
Query 139439 TATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCC 139498
|| || | | | || ||||| | || ||||| ||||||||||||| ||| ||||
Sbjct 9016 AATTTTCCGCATGTATTTGTCGGCGCAAGCGAAGAAACCAGCATGAGGACCACCGAATCC 8957
Query 139499 CATAGGAATACCAAA 139513
||| || | ||||||
Sbjct 8956 CATGGGCACACCAAA 8942
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578966236638880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |