Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq4109 96.9 4e-15 >seq4109 Length=12059 Score = 96.9 bits (106), Expect = 4e-15 Identities = 176/255 (69%), Gaps = 2/255 (1%) Strand=Plus/Minus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 ||||| || | || || ||| | |||||||| || ||| ||||| |||| || || Sbjct 9195 AGTCCTTCAGGGCCGTGGTATACCGCATAGAAGGCACTCATGTTTGCAAGCAAAGCCTGG 9136 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || ||||||||||| || || || || || | | |||||| ||||| | ||| || || Sbjct 9135 GCAGTGCAGATGTTGCTAGTAGCCTTTTCGCGACGAATATGTTGCTCCCGAGTCTGAAGC 9076 Query 139380 GCTAATCTGTA-TGCAGGATTGCCTTCGCTGTCCACTGACTGACCTACAATTCTGCCAGG 139438 || | | ||| || ||||| |||||| || |||||||| | ||| || Sbjct 9075 GCCAGAC-GTAGCGCCCTGTTGCCGAGTCTGTCCTTGGAGACGCCTACAATACGGCCGGG 9017 Query 139439 TATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGAATGCAGCATGAGGACCTCCGTATCC 139498 || || | | | || ||||| | || ||||| ||||||||||||| ||| |||| Sbjct 9016 AATTTTCCGCATGTATTTGTCGGCGCAAGCGAAGAAACCAGCATGAGGACCACCGAATCC 8957 Query 139499 CATAGGAATACCAAA 139513 ||| || | |||||| Sbjct 8956 CATGGGCACACCAAA 8942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578966236638880