Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq819 104 4e-17
>seq819
Length=4427
Score = 104 bits (114), Expect = 4e-17
Identities = 132/182 (73%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 171888 ATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTC 171947
||||| || || || | || ||| |||| || | ||||| || || || || | ||
Sbjct 1989 ATATTGTAGTCGGAGAGAGTTCGGCCGTCCTCAAGCTGTTTTCCTGCGAAGATAAGTCGT 1930
Query 171948 TGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTA 172007
|| ||||| ||||| || || ||||||||||| ||||| |||| || || || |||
Sbjct 1929 TGCTGGTCTGGTGGGATACCCTCTTTATCTTGGATTTTGCTTTTAACGTTGTCGATGGTA 1870
Query 172008 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGC 172067
||||| ||| ||||| |||||||| ||||| || || | || || | ||| ||||||
Sbjct 1869 TCTGAGCTTTCGACTTCAAGAGTAATAGTTTTGCCGGTAAGGGTCTTTACGAAGATCTGC 1810
Query 172068 AT 172069
||
Sbjct 1809 AT 1808
Score = 95.1 bits (104), Expect = 2e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 171858 AATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCTGATAAAGATCGTTCGTCA 171917
|| || ||||| | ||| ||| || ||| || || || || | | ||| | ||
Sbjct 2247 AACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAAAGCGTTCGACCATCT 2188
Query 171918 TCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTTTATCT 171977
|| | |||||||||||||| || | || ||| || || ||||| || ||||| || |||
Sbjct 2187 TCTAGCTGTTTACCAGCAAAGATAAGTCGCTGCTGATCTGGTGGGATCCCTTCCTTGTCT 2128
Query 171978 TGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAATGGTT 172037
|| ||||| ||||||| || || || || || || || || || || ||||||
Sbjct 2127 TGGATTTTGCTTTTTACGTTGTCAATTGTGTCAGAGCTCTCGACCTCCAGTGTGATGGTT 2068
Query 172038 TTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| ||||| | ||||| | ||| ||||||||
Sbjct 2067 TTGCCAGTCAGAGTTTTCACGAAGATCTGCAT 2036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905085719695200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |