Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_023639.1
Length=1168989
Score E
Sequences producing significant alignments: (Bits) Value
seq2446 132 4e-25
seq4334 100 2e-15
>seq2446
Length=49932
Score = 132 bits (146), Expect = 4e-25
Identities = 222/321 (69%), Gaps = 0/321 (0%)
Strand=Plus/Plus
Query 282151 TTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCACCTCC 282210
|||||||||||| || | ||| | | |||||||||||||| || || ||||| ||
Sbjct 48348 TTTTCTCTTGAATTCGTTTACAAAGTGGTTAACAAGACGATTATCGAAGTCCTCACCACC 48407
Query 282211 CAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAG 282270
||| | ||| | || | || | | || | ||| | || ||||||| || | ||
Sbjct 48408 CAAGTGAGTGTCACCAGCAGTGGACTTGACCTCGAAGATGCCCTCTTCAATAGTAAGGAG 48467
Query 282271 AGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTG 282330
| ||||| || |||||||||| || ||||| || ||||| ||| ||
Sbjct 48468 GGAGACATCGAAAGTACCACCACCCAAGTCGAAAATGAGAACATTGCGTTCACCCTCGGC 48527
Query 282331 GTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAAC 282390
|| || |||||||| ||||||| ||||||||| || ||||| || || || | | ||
Sbjct 48528 CTTCTTGTCAAGACCGTACGCAATAGCAGCAGCGGTAGGTTCGTTGATGATACGGAGGAC 48587
Query 282391 ATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 282450
||| ||||| ||||| || ||||| || || ||||| | || ||||| || || ||
Sbjct 48588 ATTGAGACCGGCAATGAGACCAGCATCCTTGGTAGCTTGGCGCTGGGAATCATTGAAGTA 48647
Query 282451 TGCAGGAACAGTAATAACGGC 282471
|| || ||||||| |||||
Sbjct 48648 GGCGGGGACAGTAACGACGGC 48668
>seq4334
Length=62496
Score = 100 bits (110), Expect = 2e-15
Identities = 87/108 (81%), Gaps = 0/108 (0%)
Strand=Plus/Minus
Query 435132 TGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTATTAAAAC 435191
||| ||||||||||| | |||||||||||||| ||| ||||| |||| ||| | || ||
Sbjct 46091 TGAGTTTTTCTTCCATGCTATGGCTGGTCGTGAGGGTCTTATTGATACTGCTGTCAAGAC 46032
Query 435192 TGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGA 435239
|||||| ||||| ||||| || | || ||||| ||| |||||||||
Sbjct 46031 TGCTGAAACTGGATATATCCAGCGGAAGCTTGTGAAGGCGCTTGAAGA 45984
Score = 86.0 bits (94), Expect = 5e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 432288 GGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCTGCACGT 432347
||||||||||| ||| | | ||| ||||||||||| ||||||||| | || || |||
Sbjct 47551 GGTAAAGAAGGCCGTCTACGTCAAAACTTGATGGGAAAACGTGTCGATTTTTCGGCTCGT 47492
Query 432348 ACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTCTCATTATT 432407
|| |||||||| |||||| ||| | || | | |||||||| ||||| ||| |||
Sbjct 47491 ACGGTTATTACAGGTGATCCGAATCTCTCTTTGGACGAAGTTGGAGTTCCGATCAGCATT 47432
Query 432408 GC 432409
||
Sbjct 47431 GC 47430
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3740412218380344
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |