Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq819 129 1e-24
>seq819
Length=4427
Score = 129 bits (142), Expect = 1e-24
Identities = 169/229 (74%), Gaps = 4/229 (2%)
Strand=Plus/Minus
Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643
|| || | ||| | || || || || ||||| || ||||| || || || || ||
Sbjct 2262 CCACCCCGCAATCTCAACACCAAATGGAGAGTGCTCTCCTTCTGAATGTTGTAGTCCGAA 2203
Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703
|| ||| ||| |||||||| ||||| ||||||||||| |||| || |||||||| ||
Sbjct 2202 AGCGTTCGACCATCTTCTAGCTGTTTACCAGCAAAGATAAGTCGCTGCTGATCTGGTGGG 2143
Query 82704 ATTCCTTCCTTATCTTGAATCTTTGC-TTTTACATTTTCAATCGTATCATTAGGT-TCTA 82761
|| |||||||| ||||| || ||||| |||||| || ||||| || ||| || | || |
Sbjct 2142 ATCCCTTCCTTGTCTTGGAT-TTTGCTTTTTACGTTGTCAATTGTGTCA-GAGCTCTCGA 2085
Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810
| |||| || || || ||||| |||| || || || || ||||||||
Sbjct 2084 CCTCCAGTGTGATGGTTTTGCCAGTCAGAGTTTTCACGAAGATCTGCAT 2036
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981771295986516
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |