Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq819 100 7e-16 >seq819 Length=4427 Score = 100 bits (110), Expect = 7e-16 Identities = 141/196 (72%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || || || || || ||||| || ||| | ||||| ||||| || || || |||| Sbjct 1823 AAGACCCTTACCGGCAAAACTATTACTCTTGAAGTCGAAAGCTCAGATACCATCGACAAC 1882 Query 206245 GT--AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCT 206302 || ||||||||| | ||||| ||||| || || || ||| ||| ||||||||| Sbjct 1883 GTTAAAAGCAAAA--TCCAAGATAAAGAGGGTATCCCACCAGACCAGCAACGACTTATCT 1940 Query 206303 TCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGT 206362 |||| ||||| ||| | || || || | ||| | |||| ||||| |||| ||||| | Sbjct 1941 TCGCAGGAAAACAGCTTGAGGACGGCCGAACTCTCTCCGACTACAATATCCAAAAAGAAT 2000 Query 206363 CTACTCTTCACCTTGT 206378 | || ||||||||||| Sbjct 2001 CCACACTTCACCTTGT 2016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181753508600924