Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq302 111 2e-18 >seq302 Length=30871 Score = 111 bits (122), Expect = 2e-18 Identities = 149/206 (72%), Gaps = 1/206 (0%) Strand=Plus/Minus Query 1455865 TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGAT 1455924 ||| ||| || ||||| | |||||| ||||| | || || || |||||| ||| Sbjct 12004 TGAACGATGATGAGCGGTACTTCATCTCACACGTGTTGGCATTCTT-CGCCGCGTCGGAT 11946 Query 1455925 GGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCA 1455984 ||||| || ||| ||||||| | || || | ||||| || | || ||||| Sbjct 11945 GGCATTGTCAACGAAAACCTGGTTGAGCGTTTCAGCGGGGAGGTTCAGGTTCCCGAGGCT 11886 Query 1455985 CGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTC 1456044 |||| || ||||| ||||||||| || || ||||| ||||| || |||||||| ||| Sbjct 11885 CGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACATTCACTCAGAGACCTACTCCCTC 11826 Query 1456045 CTGATCGACACCTACGTCAAGGACCC 1456070 || |||||||||||| ||||||| || Sbjct 11825 CTCATCGACACCTACATCAAGGAGCC 11800 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177382568031928