Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq302 111 2e-18
>seq302
Length=30871
Score = 111 bits (122), Expect = 2e-18
Identities = 149/206 (72%), Gaps = 1/206 (0%)
Strand=Plus/Minus
Query 1455865 TGAGCGACGACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGAT 1455924
||| ||| || ||||| | |||||| ||||| | || || || |||||| |||
Sbjct 12004 TGAACGATGATGAGCGGTACTTCATCTCACACGTGTTGGCATTCTT-CGCCGCGTCGGAT 11946
Query 1455925 GGCATCGTGGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCA 1455984
||||| || ||| ||||||| | || || | ||||| || | || |||||
Sbjct 11945 GGCATTGTCAACGAAAACCTGGTTGAGCGTTTCAGCGGGGAGGTTCAGGTTCCCGAGGCT 11886
Query 1455985 CGTTTGTTTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTC 1456044
|||| || ||||| ||||||||| || || ||||| ||||| || |||||||| |||
Sbjct 11885 CGTTGCTTCTACGGCTTCCAGATCATGATGGAGAACATTCACTCAGAGACCTACTCCCTC 11826
Query 1456045 CTGATCGACACCTACGTCAAGGACCC 1456070
|| |||||||||||| ||||||| ||
Sbjct 11825 CTCATCGACACCTACATCAAGGAGCC 11800
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177382568031928
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |