Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq3947 102 1e-16
>seq3947
Length=14563
Score = 102 bits (112), Expect = 1e-16
Identities = 274/415 (66%), Gaps = 23/415 (6%)
Strand=Plus/Minus
Query 11453 TCAAAACGACCCGGGCGAAGGAGGGCGTCATCAAGGATATCCACGCGATTAGTGGCCGCA 11512
||||| || || || || || ||||| | |||||||||||| || ||||| || | ||
Sbjct 7384 TCAAATCGGCCAGGTCGCAGCAGGGCCTTATCAAGGATATCAACCCGATTCGTTCCAGCC 7325
Query 11513 ATAACCACAATGCCAGTCTCAT---TGTCAAAGCCATCCATCTCGGTGAGTAATTGATTA 11569
| || || | | || ||| ||| ||||| ||||| || ||||| | |||||
Sbjct 7324 AGGACAACGA--CTTGT-TCAGAAGTGTTGAAGCCGTCCATTTCCGTGAGAATCTGATTC 7268
Query 11570 ATTGTTTGTTCTCTCTCATCATTTGCTGGCATACCACCAGCACTGCGTTGC--------- 11620
| || ||| | ||| || ||| | ||||||| | | || |
Sbjct 7267 AGCGTGCTTTCCCGCTCGTCGTTTCC------ACCACCATAAGCGTTTTTCGATCTCGAT 7214
Query 11621 TTGCCCACCGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCGATT 11680
|| || | |||||||||||||| ||||| | |||||| ||| |||| |||||| ||
Sbjct 7213 TTTCCAATAGCATCAATCTCATCGATGAATATAATACAGGGTGTGTTTTTGCGGGCTGTT 7154
Query 11681 TCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCG 11740
|||| ||||| ||||| | || || |||||||||||||| ||||| || | |
Sbjct 7153 GCAAATAGATCACGAACTCGGGAGGGTCCAACACCAACAAACATTTCCACGAATTCAGAA 7094
Query 11741 GCAGAGCACTGGAT-GAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 11799
|| ||| || || || ||| || || || || | ||| ||| || | ||
Sbjct 7093 CCA-CTCACGCTATAAAACGGAACACCAGACTCGCCAGCTGTAGCTTTGGCCAGTAATGT 7035
Query 11800 CTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCA 11854
||| || ||||| || || | || | ||||||||||||||||| ||||||
Sbjct 7034 CTTACCGGTACCCGGTGGTCCAGAAAGGATAGCGCCTCGGGGGATCTTAGCACCA 6980
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 627997112822400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |