Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq302 111 2e-19 >seq302 Length=30871 Score = 111 bits (122), Expect = 2e-19 Identities = 162/226 (72%), Gaps = 6/226 (3%) Strand=Plus/Minus Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGT 94789 |||| || || || | |||||||| |||||||| || ||| |||| |||| ||| Sbjct 11709 CAGTCCCCTGCATCCGCAAGAAAGCTGATTGGGCCATCCGATGGATTGAAGACAAGGAGT 11650 Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849 | | ||||||| |||| || |||| || || |||||| || ||||||||| | Sbjct 11649 C---TACCTTTGCGCAGCGTCTTGTCGCCTTCGCTGCTGTTGAAGGCATCTTCTTCAGCG 11593 Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909 | |||||| | || | ||||| ||||| || ||||| ||||| ||||| || | Sbjct 11592 GATCCTTCGCTTCAATCTTCTGGCTGAAGAAACGCGGTCTTATGCCTGGTCTTACGTTTT 11533 Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 | ||||||||||| |||||||||||||| | ||| || ||||| Sbjct 11532 CTAACGAGCTTATTTCTCGTGACGAGGGCTTACACACTGATTTTGC 11487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583228399862560