Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq302 111 2e-19
>seq302
Length=30871
Score = 111 bits (122), Expect = 2e-19
Identities = 162/226 (72%), Gaps = 6/226 (3%)
Strand=Plus/Minus
Query 94733 CAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTGAT-ACAA--AGT 94789
|||| || || || | |||||||| |||||||| || ||| |||| |||| |||
Sbjct 11709 CAGTCCCCTGCATCCGCAAGAAAGCTGATTGGGCCATCCGATGGATTGAAGACAAGGAGT 11650
Query 94790 CGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTG 94849
| | ||||||| |||| || |||| || || |||||| || ||||||||| |
Sbjct 11649 C---TACCTTTGCGCAGCGTCTTGTCGCCTTCGCTGCTGTTGAAGGCATCTTCTTCAGCG 11593
Query 94850 GTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCT 94909
| |||||| | || | ||||| ||||| || ||||| ||||| ||||| || |
Sbjct 11592 GATCCTTCGCTTCAATCTTCTGGCTGAAGAAACGCGGTCTTATGCCTGGTCTTACGTTTT 11533
Query 94910 CCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955
| ||||||||||| |||||||||||||| | ||| || |||||
Sbjct 11532 CTAACGAGCTTATTTCTCGTGACGAGGGCTTACACACTGATTTTGC 11487
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583228399862560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |