Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06-
09] 4,444 sequences; 29,708,924 total letters
Query= NC_029304.1
Length=111246
Score E
Sequences producing significant alignments: (Bits) Value
seq819 95.1 9e-15
>seq819
Length=4427
Score = 95.1 bits (104), Expect = 9e-15
Identities = 164/234 (70%), Gaps = 6/234 (3%)
Strand=Plus/Plus
Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849
||||| || || ||||||||||| ||||| ||| || ||| | || ||||| ||| |
Sbjct 2036 ATGCAGATCTTCGTGAAAACTCTGACTGGCAAAACCATCACACTGGAGGTCGAGAGCTCT 2095
Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907
| || || |||| || ||| ||||| ||||| ||||| | || || |
Sbjct 2096 GACACAATTGACAA--CGTAAAAAGCAAAATCCAAGACAAGGAAGGGATCCCACCAGATC 2153
Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTAC 27966
|||| || | || ||||| || ||||| | || || | || | |||| || || |||
Sbjct 2154 AGCAGCGACTTATCTTTGCTGGTAAACAGCTAGAAGATGGTCGAACGCTT-TCGGACTAC 2212
Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGAC 28020
||||| || || ||||||||| | |||||||| ||| | ||||| || ||| ||
Sbjct 2213 AACATTCAGAAGGAGAGCACTCTCCATTTGGTGTTGAGATTGCGGGGTGGCCAC 2266
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 355843126047588
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |