Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Emmonsia_20sp._20CAC-2015a_20[genbank_20GCA_5F001660665.1_202016-06- 09] 4,444 sequences; 29,708,924 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq819 95.1 9e-15 >seq819 Length=4427 Score = 95.1 bits (104), Expect = 9e-15 Identities = 164/234 (70%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||||| || || ||||||||||| ||||| ||| || ||| | || ||||| ||| | Sbjct 2036 ATGCAGATCTTCGTGAAAACTCTGACTGGCAAAACCATCACACTGGAGGTCGAGAGCTCT 2095 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | || || |||| || ||| ||||| ||||| ||||| | || || | Sbjct 2096 GACACAATTGACAA--CGTAAAAAGCAAAATCCAAGACAAGGAAGGGATCCCACCAGATC 2153 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCA-GCTTGTCCGATTAC 27966 |||| || | || ||||| || ||||| | || || | || | |||| || || ||| Sbjct 2154 AGCAGCGACTTATCTTTGCTGGTAAACAGCTAGAAGATGGTCGAACGCTT-TCGGACTAC 2212 Query 27967 AACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGGCGAC 28020 ||||| || || ||||||||| | |||||||| ||| | ||||| || ||| || Sbjct 2213 AACATTCAGAAGGAGAGCACTCTCCATTTGGTGTTGAGATTGCGGGGTGGCCAC 2266 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355843126047588