Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq11 104 5e-17 >seq11 Length=1431289 Score = 104 bits (114), Expect = 5e-17 Identities = 268/403 (67%), Gaps = 4/403 (1%) Strand=Plus/Minus Query 230237 CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTAACGAGTTCA 230296 ||||||| ||||| ||| ||| | ||||| ||| | | || |||||| ||| Sbjct 758659 CCATCTTCTGGCTCAAGAAGCGCGGTCTCATGCCCGGCTTGACCTTCTCCAACGAGCTCA 758600 Query 230297 TCAGTCGCGACGAGGGTCTCCATCAAC-AGTTCGGCGAGCTTATGTATTCAAAGCTCCAG 230355 || ||||||||||||||||| || | | |||| | || ||| || | ||| | Sbjct 758599 TCTCCCGCGACGAGGGTCTCCA-CACCGACTTCGCCTGCCTGCTGTTCTCCCACCTCAAC 758541 Query 230356 AACAAGCT-ACCATTCGAGACGGTCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAA 230414 ||| | | || | ||| | | | | ||||| | || || || | | ||| | Sbjct 758540 AACCGCCCCAGCAAGC-AGATGATTCAGGAGATCATCATGGACGCCGTCAAGATCGAGCA 758482 Query 230415 GGAGTTCATTTGTGACGCTATTCCATGTCGCCTTATTGGCATGAACGCTGAACTTATGGG 230474 ||||||| | || || | || || ||| | ||||||||| | | || ||| Sbjct 758481 GGAGTTCCTGACCGAGGCCCTGCCTTGCGCCCTCCTCGGCATGAACTCGAACCTCATGAA 758422 Query 230475 ACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTA 230534 ||||||||||| ||||| ||||||||| | | || || || || ||||||| || || Sbjct 758421 GCAGTACATCGAGTTCGTCGCCGACCGCCTCCTCGTCGCCCTCGGCAACGAGAAGGTCTA 758362 Query 230535 CAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTT 230594 | || ||||| || | ||||||||| ||| || || || ||||||||||| Sbjct 758361 CCGGTCCGCCAACCCGTTCGACTTTATGGAGAACATCTCTCTCGGCGGCAAGACCAACTT 758302 Query 230595 CTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATG 230637 |||||| ||||| ||| | || || |||| | | || || ||| Sbjct 758301 CTTCGAGAAGCGCGTCGGCGAGTACCAGAAGGCCGGCGTCATG 758259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057823769592710