Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq11 93.3 4e-14 >seq11 Length=1431289 Score = 93.3 bits (102), Expect = 4e-14 Identities = 194/287 (68%), Gaps = 3/287 (1%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || || ||||| || ||| | |||||||| ||||||||||| ||||| Sbjct 758901 ATGTAGGTGTCAATGAGAAGAGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGG 758960 Query 17294 AATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGA 17353 || ||||| |||||||| ||||| | || ||||| || || ||| || || | || Sbjct 758961 AAACCGTAGAAGCATCGAGCTTCGGGGATCTGAACCTCTCCGCTGAAACGCTCGACAAGG 759020 Query 17354 TTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATAT 17413 || ||||| ||||| ||||| |||||||| || || | || || ||||| || Sbjct 759021 TTCTCGTTGACGATACCGTCCGAAGCGGCGAAGAAGGCAAGGATGTGAGAGATGAAGTAC 759080 Query 17414 TTTTCGTC--CGGTG-TAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCT 17470 || || || || || | | ||| || | | ||| ||||| | ||| | || Sbjct 759081 TTCTCATCCTCGTTGATTCTGTTGTTCCAATCGTGGAGATCCTTGGAAAGATCGATCTCC 759140 Query 17471 TCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAAT 17517 |||| ||||| ||| ||| | ||||| || ||||| | ||| || Sbjct 759141 TCGGCAGTCCAGAAAGAGGCCTCGGCCTTCTTGTACATCTGCCAGAT 759187 Score = 86.0 bits (94), Expect = 6e-12 Identities = 124/175 (71%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| ||| || ||||| ||| || | |||||||| | | ||| || ||||| || Sbjct 758554 AACAGCAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAG 758613 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || ||||| |||||||| || || ||||| | ||| || || | |||||| | || Sbjct 758614 AAGGTCAAGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCG 758673 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCG 17129 ||||| ||||||||||||| || || ||||| || || | ||| | |||| Sbjct 758674 CTGAAGAAGATACCCTCGACGGCGGCGAAGGCGATCAAACGCTGAGCGAAAGTCG 758728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517545490021560