Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq11 179 4e-40 >seq11 Length=1431289 Score = 179 bits (198), Expect = 4e-40 Identities = 1305/2085 (63%), Gaps = 68/2085 (3%) Strand=Plus/Minus Query 52798 CTTG-TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 52856 |||| |||| ||||| || ||||| || || | || ||||| ||||||||||||| Sbjct 453249 CTTGATCCACGGTGAACTGGATGGGCTGGGCGGCAGCTTGGGTACGGAGATAGTACATTC 453190 Query 52857 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCG 52916 |||| || |||||||| |||| || || ||||| || || | ||| | | | Sbjct 453189 CCGTCTTGAGACCGAGCTTCCAACCCGTGAAGTGCATGCTCGTGATCTTGCCCATAGTGG 453130 Query 52917 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 52976 | ||| || || || || | ||| || ||||||||||| || || | ||| |||| Sbjct 453129 GTTCTCTCATGTGAATGTTAAGAGACTGGGACTGATCGATGAACGCACCACGGTCGGCAG 453070 Query 52977 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 53036 |||| | | | || || | |||||||||| || || || | | ||| |||| Sbjct 453069 CCATCTGGACAACGGTACGCTGAGAGATTTCCCAAACCGTCTTGTACAATGCCTTGATAT 453010 Query 53037 CTTCTGGAAGGTTTG---TATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGA 53093 | | |||| | | | | ||||| || || ||||| || | ||||| | ||||| | Sbjct 453009 CAGCAGGAATGCTGGGGATGTTCTGGATCGAACCACCTTCGGCAATAATGCGGTTCTTCA 452950 Query 53094 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 53153 | | ||| ||| | | ||| | | | || || || ||||| || | Sbjct 452949 TGTTGTCAGACCACAGACCCATGTCGACAAGGTCCTTGAGTAGCCAAGGGTTAACAACCT 452890 Query 53154 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 53213 | || ||||| | | || | || | ||| || || ||| || || || | ||| Sbjct 452889 GGAACTCTCCCGCGAGGACACGACGCGAGTAGATGTTGGAGGTGTAAGGCTCAAAGCACT 452830 Query 53214 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 53273 |||| || ||||| ||||| | ||| || || ||||| || || ||||| ||||| | Sbjct 452829 CATTGTTACCCAAGATTTGCGAAGTGCTGGCTGTGGGCATGGGGGCGACCAACAAACTGT 452770 Query 53274 TTCTAAGACCGT-ATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 53332 | | | ||||| || | |||| | | |||||| ||||| | ||| ||||| | Sbjct 452769 TACGGACACCGTGCTGCT-TGATCTGCTGCTTTAGACTATCCCAGTCCCAGAGATCGGTG 452711 Query 53333 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTAC----GATCCTAC 53388 || || ||| || ||||| |||| || || || | Sbjct 452710 GGCTTGACATCCCACATGTCGTATTGAAGGATACC----CTGGGAGACCGGGGAGCCCTC 452655 Query 53389 ATATGTATCGTATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACC 53445 || | |||| || || |||||| ||| || || |||| || || | Sbjct 452654 GTAGCTGGCGTAGGGACCGAGTTCCTT---AGCGAGCTCCATGGACGCCGTCAAGGCGGC 452598 Query 53446 GTAATAAATGGTTTCGAAGATCTTCTTATTTAG-ATCTTGTGCTTCCAGGCTA-TCAAAT 53503 || || ||||| |||||||| | || || || | ||| || ||||| | || ||| Sbjct 452597 GTGGTAGATGGTCTCGAAGATTTGTTTGTTAAGTAACTTAGCCT--CAGGCGATTCGAAT 452540 Query 53504 GGATAATTTAAGAG-AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 53562 || | || |||| | || || || || | ||||| ||||| | ||||| || | Sbjct 452539 GGGT-ATCGGAGAGCTAGGAAAGCATCGGCAAGACCTTGGACACCCAATCCGATGGGACG 452481 Query 53563 ATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 53622 || | | | || | | ||| || || | || || | || | || || || || Sbjct 452480 GTGGCGCATGTTGCTGTTGCGAGCCTCAGGTACGGGGTAGTGGTTGACCTCAATGATCTT 452421 Query 53623 ATTGAGGTTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATTGTCC 53682 || || |||| || | || | ||| || || | || || | ||||| | || Sbjct 452420 GTTCAGATTTCGCACGACCACCTGGACAACGTCGTGCAACTTCTGGAAATCGTAGGCGCC 452361 Query 53683 ----ATCTATT--ACAAAC-ATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCT 53735 | || | ||| || | | | || |||| || ||||| || || || || |||| Sbjct 452360 CGCGTTGTAGTCCACATACGAAGGT-AAGGCAAGGGAAGCCAGGTTGCACACAGCGACCT 452302 Query 53736 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 53795 ||| || | ||| || | || ||||| ||||| || ||| || || ||||| | Sbjct 452301 CATCAGGAGCCGAGTACTCAATAATCTCGGTGCAGAGGTTAGAACTGCGAATAGTTCCCA 452242 Query 53796 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAG 53855 || | || || ||||| ||| || |||||| ||||| |||||||| |||||| Sbjct 452241 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAATGGGTTACCAG 452182 Query 53856 TTTCAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTA--TTATAGATTT 53913 | ||| |||| | || | || || | ||| | | ||||| | || | | Sbjct 452181 TCTCAGTCTGAGCCTCGAGGATGGCATACCAAAGTTTCTGGGCCTTGACCTTCTGG--CG 452124 Query 53914 GTATCTCTTTTCTCTTTCGTA--TAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACA 53971 | | || |||||| | ||| | | | || ||||| || || | || Sbjct 452123 GCCACGGCCCTCGGCTTCGTACTTCTCGTACAGAGCC--TCGAACTCATCGCCGTAGACG 452066 Query 53972 TTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACT 54031 | | | ||||| || || | |||||||| | || ||| || |||| | || || Sbjct 452065 TCAGCGAGGCCAGGGCACTCGTTGGGACACATGAGCGTCCATTCACCGTTCTTCTCAACA 452006 Query 54032 CGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCC 54091 || ||||| || ||||| |||||||| ||||| | || ||||| | | | | |||| Sbjct 452005 CGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAAAGATCGCGAGCGCGAACTTCC 451946 Query 54092 TCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCC 54151 || ||||| ||||| ||||| | |||| | | || ||| || |||||||| || Sbjct 451945 TCCTTTCCGTGGTTCTTACGGAGATCCAAGAACTCGAAAACATCCGAGTGCCACGGCTCG 451886 Query 54152 AAGTATATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 54211 | ||| |||| | | ||||| | ||||| || ||||| || | |||||| || ||| Sbjct 451885 AGGTAGATGGCAAAGGCACCAGGTCTCTTGTTGCCACCCTGGTCAACGTATCTGGCCGTG 451826 Query 54212 TTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATA 54271 || || | || | | ||| || | |||||| || || | ||| ||||| |||| || Sbjct 451825 TTGTTGAAGACACGAAGCATAGGTACAATACCGTTAGAAGTACCGTTGGTACCGGCAATG 451766 Query 54272 TAGCTTCCACTGGCACGAATATTACTAA--TTGATAGACCTATCCCCCCTGCCATTTTAG 54329 || ||| | | || ||| || ||| ||||| || || || ||||| || | Sbjct 451765 TAAGATCCGGTAGATCGGATACGGTGAACGTTG--AGACCAATACCACCCGCCATCTTGG 451708 Query 54330 AGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGT 54389 |||| | || || || | || |||||||| ||||| || || |||||| |||||| Sbjct 451707 AGATCATAGCACAAGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTCATGT 451648 Query 54390 TAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGTA 54445 | || ||||| ||| | ||| | || || || || || || | ||| Sbjct 451647 CTACAAGGAAACA---AGAGGAAAGCTGA-GCCTGGGGGGTACCGGCGTTGAAAAGGGTG 451592 Query 54446 GGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGAT-AGCT----- 54499 || || ||||| || || |||| || | |||||||| ||||| || | || Sbjct 451591 GGGGAGGCGTGGGTGAAATATTTGCTGGACATGAGATTGTATGTCTCAATGACCTTTTCA 451532 Query 54500 GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTT 54559 ||| | |||| || || || || |||||||| | ||||||||| || | Sbjct 451531 ACGTCGTCACCCCA------GATACCGACGGCAACACGCATGATCATGTGCTGCGGCCGC 451478 Query 54560 TCAACGATCTTGTTGTTTATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAA 54619 || | || ||| || | || || | ||| ||| |||||||| || || ||||| Sbjct 451477 TCGGCAATTTTGCCATTGAGCTTGAGAAGGTATGATCGCTCCAAAGTCTTGAAGCCAAAG 451418 Query 54620 TAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACTGAGTTGAGTTTATCCTTATATTTG 54679 || | ||| |||||||| ||||| | || | |||| || | |||||||| | Sbjct 451417 TATTGGTAGTTGAAGTCTCGGTCGTAGACGATTGCCGAGTCGAAATCATCCTTATGCCTC 451358 Query 54680 TTAACTACATCCAT-GGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGATT 54738 | || ||| ||| ||| | | ||| || || ||| | || |||| | || || Sbjct 451357 ATGAC-ACACTCATAAGTATCTTTGGCAATCATAGGCGAAGGCTTGTTATTTCTGGGGTT 451299 Query 54739 GACATAGTTAAATAAATCCTTCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAG 54798 || || | ||| ||| | | || | | | || || || | |||||||| Sbjct 451298 GATGTAATGGTATAGATCGCTGACAACCGAAGACCACTGCTTCTTAGTCTGCTTGTGTAG 451239 Query 54799 ATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 54843 ||||| ||||| || | || || || ||||||||||| || || Sbjct 451238 GTTTGAAACGGCAATACGGGCAGCCAGGATGGCATAATCTGGGTG 451194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 593721473834160