Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq1 167 3e-36 >seq1 Length=7732581 Score = 167 bits (184), Expect = 3e-36 Identities = 243/340 (71%), Gaps = 4/340 (1%) Strand=Plus/Minus Query 145921 TCCGCCGGGTTCCAGGCGGTGAGGACGA-GCCTCCTGCTC-TCGGGGTTCCTCTTGATCT 145978 || ||||||||||||||| |||||| || || || | || | ||||| | ||| || Sbjct 2738760 TCGGCCGGGTTCCAGGCGCTGAGGATGATGCGTC--GATCGTACGGGTTATGCCTGAGCT 2738703 Query 145979 CCCCTATCAGGTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCA 146038 |||| || ||||| || |||||||| ||| |||||| ||||| | ||||| Sbjct 2738702 TGTGGATCACCTCGGCCAGCTGATCGACGCCCTGACCCGCGTAATCCGTCTTCGCGTCCA 2738643 Query 146039 CGTACGCGGCCCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCT 146098 ||||| ||||||||||||| | ||||||||||||||| || ||||||||||| || || Sbjct 2738642 CGTACTCGGCCCCGAAGTGTCGCCACTGGAACCCGTACACCGGCCCCAGGTCGCCCACCT 2738583 Query 146099 CCCTGTGCCCCAGCCCGGCCCGGGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCT 146158 | | ||| ||| || | | | ||||||| || || |||||||| ||||||| |||| Sbjct 2738582 CGCGATGCGACAGTCCCACGCTGTCGAGGAACTCGCGCGACCCGTTCCCGTCCCATATCT 2738523 Query 146159 TGACGCCCCTCGCGGAGAGCTCATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCT 146218 |||| || | | || ||| | || |||| |||| | |||||| || |||| Sbjct 2738522 TGACCCCGGCCTCCGATAGCGCCAGCGACGACGTGTTCCCCTCCACGAACCATAGAAGCT 2738463 Query 146219 CTTCGAGGACCCCCCTCCAGAAGACCCTCTTGGTGGTCAG 146258 | | | ||| || | |||||||| ||| || ||||| Sbjct 2738462 CCGCTACGACGGCCTTGAGGAAGACCCGCTTCGTCGTCAG 2738423 Score = 127 bits (140), Expect = 2e-24 Identities = 224/322 (70%), Gaps = 7/322 (2%) Strand=Plus/Minus Query 145535 ATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAAAGT 145594 |||| |||| ||||| ||| | ||| | | ||| |||| || ||| | ||| | Sbjct 2739224 ATTATACCGACATCTTCATAGCGATAGTCTTGTGCGGGTTATATTCCTTGACGAAAAACT 2739165 Query 145595 CCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGCCTGGGA 145650 |||||||| | | | || | | | || |||||||| | ||| |||| || Sbjct 2739164 CCTCCGCCTTCCACCCGTCGACGCTC-CCGCCCGCCTCCCGCGCGATCTCGAGCGACGGG 2739106 Query 145651 AAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGAC 145709 || | || ||| ||| | || ||||| | | || | || ||||||| | ||| || Sbjct 2739105 AACGCCCTGGG-CTCGCGCTCGAGCTGCACCCGGAGCGCATCGACGTGGTCGCAGTACAC 2739047 Query 145710 GTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGGCGAC 145769 ||||||||| |||| |||||| | | | ||||||| |||| | | ||| |||| Sbjct 2739046 GTGCGCGTCGCCCATGACGTGCGTCAGGCTCCCGGGCACGAGCTCGCACACGTGCGCGAT 2738987 Query 145770 CATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCC 145829 ||||| ||||| || | ||||||||| |||||||| ||||| ||||| |||||||| | Sbjct 2738986 CATGTGCGTCAGGAGCGCGTAGCTGGCGATGTTGAACGGCACGCCCAGGCCCATGTCGCA 2738927 Query 145830 CGAGCGCTGGTACAGCTGGCAG 145851 ||||||||||| ||||| ||| Sbjct 2738926 GGAGCGCTGGTATAGCTGACAG 2738905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076674608680