Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq11 118 2e-21 >seq11 Length=1431289 Score = 118 bits (130), Expect = 2e-21 Identities = 188/267 (70%), Gaps = 2/267 (1%) Strand=Plus/Minus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || || || | || || || |||||||||| || || ||| || || Sbjct 451741 TGAACGTTGAGACCAATACCACCCGCCATCTTGGAGATCATAGCACAAGTCTTGAGGGTG 451682 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 ||||| |||||||||||||| ||||| | | | | | |||||| || |||||||| || Sbjct 451681 TCATAGATACCCTCAATGCTGTCATCCTTCATGTCTACAAGGAAACAAGAGGAAAGCTGA 451622 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953 | | || || || || || |||||||| || ||||| ||||| | || ||| Sbjct 451621 GCCTGGGGGGTACCGGCGTTGAAAAGGGTGGGGGAGGCGTGGGTGAAATATTTGCTGGAC 451562 Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTC-TGATCCGTGAATGCCGACAGCCAC 95012 ||||||| ||||| |||||||| || | ||| | | || | || ||||| || || Sbjct 451561 ATGAGATTGTATGTCTCAATGACCTTTTCAACGTCGTCACCCCAG-ATACCGACGGCAAC 451503 Query 95013 ACGCATAATCATGTCCTGAGGGCGCTC 95039 |||||| ||||||| ||| || ||||| Sbjct 451502 ACGCATGATCATGTGCTGCGGCCGCTC 451476 Score = 95.1 bits (104), Expect = 2e-14 Identities = 118/159 (74%), Gaps = 6/159 (4%) Strand=Plus/Minus Query 94398 GCCTTCAGCCTCATATTTCTCGTACAACGCCTTAAACTCTTCGCCATGGACGTCGGAAAG 94457 ||| || || || || |||||||||| |||| ||||| ||||| | |||||| | || Sbjct 452117 GCCCTCGGCTTCGTACTTCTCGTACAGAGCCTCGAACTCATCGCCGTAGACGTCAGCGAG 452058 Query 94458 GCCAGGGCACTCGTGGGGGCACATCAGGGACCAATTCTTCCCAGCCTTC---ACTCTCTC 94514 |||||||||||||| ||| ||||| || | || |||| || |||| || | || Sbjct 452057 GCCAGGGCACTCGTTGGGACACATGAGCGTCC-ATTC--ACCGTTCTTCTCAACACGCTT 452001 Query 94515 CATGAAGAGATCAGATACCCAGATAGCTGGGAAAAGATC 94553 |||||| ||||| | | ||||| ||| |||||||||| Sbjct 452000 CATGAAAAGATCGGGAATCCAGAGAGCAAGGAAAAGATC 451962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989583784456235