Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq11 114 2e-20 >seq11 Length=1431289 Score = 114 bits (126), Expect = 2e-20 Identities = 352/537 (66%), Gaps = 8/537 (1%) Strand=Plus/Minus Query 70791 CTTG-TCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGC 70849 |||| |||| || ||||| ||||| || || |||| ||||| ||||||||||| | Sbjct 453249 CTTGATCCACGGTGAACTGGATGGGCTGGGCGGCAGCTTGGGTACGGAGATAGTACATTC 453190 Query 70850 CTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTG-GAATAGCTA 70908 | || || |||||||| |||| || || ||||| ||||| | ||| |||| | Sbjct 453189 CCGTCTTGAGACCGAGCTTCCAACCCGTGAAGTGCATGCTCGTGATCTTGCCCATAG-TG 453131 Query 70909 GGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCA 70968 || || |||||||| || | ||||| ||||||||||| || || | ||| ||| Sbjct 453130 GGTTCTCTCATGTGAATGTTAAGAGACTGGGACTGATCGATGAACGCACCACGGTCGGCA 453071 Query 70969 GCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATA 71028 ||||| | | | || || | |||||||||| || || || | | ||| ||| Sbjct 453070 GCCATCTGGACAACGGTACGCTGAGAGATTTCCCAAACCGTCTTGTACAATGCCTTGATA 453011 Query 71029 TCTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTG 71085 || | |||| | | | | ||||| || || ||||| || |||||||| | || || Sbjct 453010 TCAGCAGGAATGCTGGGGATGTTCTGGATCGAACCACCTTCGGCAATAATGCGGTTCTTC 452951 Query 71086 ATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACT 71145 || | ||| ||| | | ||| | | | || || ||| ||||| || Sbjct 452950 ATGTTGTCAGACCACAGACCCATGTCGACAAGGTCCTTGAGTAGCCAAGGGTTAACAACC 452891 Query 71146 TGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGAC 71205 || || ||||| | | || | ||| | ||| || || ||| || || || | || Sbjct 452890 TGGAACTCTCCCGCGAGGACACGACGCGAGTAGATGTTGGAGGTGTAAGGCTCAAAGCAC 452831 Query 71206 TCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTA 71265 ||||| || ||||| ||||| | ||| || || ||||| || || ||||| | ||| Sbjct 452830 TCATTGTTACCCAAGATTTGCGAAGTGCTGGCTGTGGGCATGGGGGCGACCAACAAACTG 452771 Query 71266 TTTCTAAGACCATG-TGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATC 71321 || | | ||| || || | ||| | | |||||| ||||| | ||| ||||| Sbjct 452770 TTACGGACACCGTGCTGCT-TGATCTGCTGCTTTAGACTATCCCAGTCCCAGAGATC 452715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139057382920