Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=7732581 Score = 84.2 bits (92), Expect = 2e-11 Identities = 173/253 (68%), Gaps = 6/253 (2%) Strand=Plus/Minus Query 5504 CCCGTGGACCCGAATCCGCCTGCGCCTCTTTCCGTATCGTCCAGGCACGCCACCTCTTCC 5563 |||||| || ||||| || ||||| | | | || || || | ||||||| || Sbjct 4756353 CCCGTGCTGCCAAATCCACCCGCGCCCCGAACGCTCTCCTCGAGCTCCTCCACCTCGACC 4756294 Query 5564 ACATCGGGGAACGCAGCGCG-CTCGCAGATCAGCTGCGCTATTCGGTCGCCCGTCTTTAC 5622 || || ||| |||| | |||| || ||||| || | ||||||||| | || Sbjct 4756293 ACGTCCGGGGT-GCAGATCCTCTCGACGACGAGCTGGGCCACCCGGTCGCCCTCCGAGAC 4756235 Query 5623 CTCGAAATCGTTGTGGCCGAA--GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCG 5680 |||| ||| || |||| ||| ||||||| || ||| || ||||| ||| Sbjct 4756234 GGCGAAGTCGGCGT--CCGAGTGGTTAAACAGCAGGACTTTGACGGGTCCCCGGTAATCG 4756177 Query 5681 GCGTCTATCACGCCCGCGCCCACGTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGA 5740 ||||| || ||||| || ||| |||||||||||||||| || |||||||| ||||| Sbjct 4756176 GCGTCGATGACGCCGGCTCCCGTGTCGATGAAGTGCTTGGAGGCTAGGCCGGATCGGGGT 4756117 Query 5741 GCCACGCGGCCGT 5753 || || | ||||| Sbjct 4756116 GCTACTCTGCCGT 4756104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430054310898104