Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq4 113 7e-21 seq2 96.9 5e-16 >seq4 Length=4458946 Score = 113 bits (124), Expect = 7e-21 Identities = 86/99 (87%), Gaps = 2/99 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 |||||||||||||| | ||| |||||| || |||||||| || ||||| ||||| ||||| Sbjct 2466890 GCTAAGCGTCATCGTAAGAT-TCTTCGTGACAACATCCAGGGTATCACAAAGCCCGCTAT 2466832 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTC 16530 ||| ||||| |||||||||||||| ||||||||| |||| Sbjct 2466831 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTC 2466793 >seq2 Length=5912960 Score = 96.9 bits (106), Expect = 5e-16 Identities = 80/95 (84%), Gaps = 2/95 (2%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| |||||||| || | ||| |||||| || ||||| || || || |||||||| |||| Sbjct 2024830 CGCCAAGCGTCACCGAAAGAT-TCTTCGTGACAACATTCAGGGTATTACCAAGCCCGCTA 2024888 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGT 16525 |||| ||||| |||||||||||||| ||||||||| Sbjct 2024889 TCCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGT 2024923 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075184456781