Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq11 255 7e-63 >seq11 Length=1431289 Score = 255 bits (282), Expect = 7e-63 Identities = 1325/2086 (64%), Gaps = 70/2086 (3%) Strand=Plus/Minus Query 61985 CTTG-TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 62043 |||| |||| ||||| || ||||| || || | || ||||| ||||||||||||| Sbjct 453249 CTTGATCCACGGTGAACTGGATGGGCTGGGCGGCAGCTTGGGTACGGAGATAGTACATTC 453190 Query 62044 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 62103 |||| || |||||||| |||| || || ||||| ||||| | ||| | | | Sbjct 453189 CCGTCTTGAGACCGAGCTTCCAACCCGTGAAGTGCATGCTCGTGATCTTGCCCATAGTGG 453130 Query 62104 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62163 | ||| || || || || | ||| || ||||||||||| || || | ||| |||| Sbjct 453129 GTTCTCTCATGTGAATGTTAAGAGACTGGGACTGATCGATGAACGCACCACGGTCGGCAG 453070 Query 62164 CCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62223 |||| | | | || || | |||||||||| || || || | | ||| |||| Sbjct 453069 CCATCTGGACAACGGTACGCTGAGAGATTTCCCAAACCGTCTTGTACAATGCCTTGATAT 453010 Query 62224 CTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62280 | | |||| | | | | ||||| || || ||||| || || ||||| | ||||| | Sbjct 453009 CAGCAGGAATGCTGGGGATGTTCTGGATCGAACCACCTTCGGCAATAATGCGGTTCTTCA 452950 Query 62281 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62340 | | ||| ||| | | ||| | | | || || || ||||| || | Sbjct 452949 TGTTGTCAGACCACAGACCCATGTCGACAAGGTCCTTGAGTAGCCAAGGGTTAACAACCT 452890 Query 62341 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACCGACT 62400 | || ||||| | | || | || | ||| || || ||| || || || | ||| Sbjct 452889 GGAACTCTCCCGCGAGGACACGACGCGAGTAGATGTTGGAGGTGTAAGGCTCAAAGCACT 452830 Query 62401 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62460 |||| || ||||| ||||| | ||| || || ||||| || || ||||| ||||| | Sbjct 452829 CATTGTTACCCAAGATTTGCGAAGTGCTGGCTGTGGGCATGGGGGCGACCAACAAACTGT 452770 Query 62461 TTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 62519 | | | ||||| || | |||| | | |||||| ||||| | ||| ||||| | Sbjct 452769 TACGGACACCGTGCTGCT-TGATCTGCTGCTTTAGACTATCCCAGTCCCAGAGATCGGTG 452711 Query 62520 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTAC----GATCCTAC 62575 || || ||| || ||||| |||| || || || | Sbjct 452710 GGCTTGACATCCCACATGTCGTATTGAAGGATACC----CTGGGAGACCGGGGAGCCCTC 452655 Query 62576 ATATGTATCGTATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACC 62632 || | |||| || || |||||| ||| || || |||| || || | Sbjct 452654 GTAGCTGGCGTAGGGACCGAGTTCCTT---AGCGAGCTCCATGGACGCCGTCAAGGCGGC 452598 Query 62633 GTAATAAATGGTTTCGAAGATCTTCTTATTTAG-ATCTTGTGCTTCCAGGCTAT-CAAAT 62690 || || ||||| |||||||| | || || || | ||| || ||||| || | ||| Sbjct 452597 GTGGTAGATGGTCTCGAAGATTTGTTTGTTAAGTAACTTAGCCT--CAGGCGATTCGAAT 452540 Query 62691 GGATAATTTAAGAGA-ATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGGTCT 62749 || || | |||| | || || || || | ||||| ||||| | ||||| || | Sbjct 452539 GGGTA-TCGGAGAGCTAGGAAAGCATCGGCAAGACCTTGGACACCCAATCCGATGGGACG 452481 Query 62750 ATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 62809 || | | | || | | ||| || || | || || | || | || || || || Sbjct 452480 GTGGCGCATGTTGCTGTTGCGAGCCTCAGGTACGGGGTAGTGGTTGACCTCAATGATCTT 452421 Query 62810 ATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAAT-CGCC 62868 || ||||||| || | || | ||| || || | || || | ||||| | |||| Sbjct 452420 GTTCAGATTTCGCACGACCACCTGGACAACGTCGTGCAACTTCTGGAAATCGTAGGCGCC 452361 Query 62869 CA---TCTATT--ACAAAC-ATGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCT 62922 | | || | ||| || | | | ||||||| || ||||| || || || || |||| Sbjct 452360 CGCGTTGTAGTCCACATACGAAGGT-AAGGCAAGGGAAGCCAGGTTGCACACAGCGACCT 452302 Query 62923 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTA 62982 ||| || | ||| || | || ||||| ||||| || ||| || |||||||| | Sbjct 452301 CATCAGGAGCCGAGTACTCAATAATCTCGGTGCAGAGGTTAGAACTGCGAATAGTTCCCA 452242 Query 62983 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 63042 || | || || ||||| ||| || |||||| ||||| |||||||| |||||| Sbjct 452241 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAATGGGTTACCAG 452182 Query 63043 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTA--TTATAGATT 63099 | ||| |||||| || | || || | ||| | | || | ||||| | || | | Sbjct 452181 TCTCAGTCTGAGCCTCGAGGATGGCATACCAAA-GTTTCTGGGCCTTGACCTTCTGGCG- 452124 Query 63100 TGTATCTCCTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63157 | | | || |||||| | ||| | | | |||||||| || || | || Sbjct 452123 -GCCACGGCCCTCGGCTTCGTACTTCTCGTACAGAGCC--TCGAACTCATCGCCGTAGAC 452067 Query 63158 ATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63217 | | | ||||| || || | |||||||| | || ||| || |||| | || || Sbjct 452066 GTCAGCGAGGCCAGGGCACTCGTTGGGACACATGAGCGTCCATTCACCGTTCTTCTCAAC 452007 Query 63218 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63277 || ||||| || ||||| |||||||| ||||| | || ||||| | | | | ||| Sbjct 452006 ACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAAAGATCGCGAGCGCGAACTTC 451947 Query 63278 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63337 ||| ||||| ||||| ||||| | |||| | | || ||| || |||||||| || Sbjct 451946 CTCCTTTCCGTGGTTCTTACGGAGATCCAAGAACTCGAAAACATCCGAGTGCCACGGCTC 451887 Query 63338 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63397 | ||| ||||| | | ||||| | ||||| || ||||| || | |||||| || || Sbjct 451886 GAGGTAGATGGCAAAGGCACCAGGTCTCTTGTTGCCACCCTGGTCAACGTATCTGGCCGT 451827 Query 63398 GTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAGAT 63457 ||| || | || | | ||| || | ||||||||| || |||| |||||||||| || Sbjct 451826 GTTGTTGAAGACACGAAGCATAGGTACAATACCGTTAGAAGTACCGTTGGTACCGGCAAT 451767 Query 63458 ATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTA 63515 || ||| | | || ||| || |||| |||| || || || ||||| || Sbjct 451766 GTAAGATCCGGTAGATCGGATACGGTGAACGTTGA--GACCAATACCACCCGCCATCTTG 451709 Query 63516 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTATCATCGATCATG 63575 ||||| | || || || | ||||||||||||||||| ||||| ||||| ||||| Sbjct 451708 GAGATCATAGCACAAGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTCATG 451649 Query 63576 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGT 63631 | | || ||||| ||| | ||| | || || || || || || | ||| Sbjct 451648 TCTACAAGGAAACA---AGAGGAAAGCTGA-GCCTGGGGGGTACCGGCGTTGAAAAGGGT 451593 Query 63632 AGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCT---- 63686 || || ||||| || || |||| || | |||||||| |||||||| | || Sbjct 451592 GGGGGAGGCGTGGGTGAAATATTTGCTGGACATGAGATTGTATGTCTCAATGACCTTTTC 451533 Query 63687 -GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63745 ||| | |||| || || || || |||||||| | ||||||||| || | Sbjct 451532 AACGTCGTCACCCCA------GATACCGACGGCAACACGCATGATCATGTGCTGCGGCCG 451479 Query 63746 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63805 || | || ||| || | || | | ||| ||| |||||||| || || ||||| Sbjct 451478 CTCGGCAATTTTGCCATTGAGCTTGAGAAGGTATGATCGCTCCAAAGTCTTGAAGCCAAA 451419 Query 63806 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63865 || | ||| |||||||| ||||| | || |||||| || | |||||||| | Sbjct 451418 GTATTGGTAGTTGAAGTCTCGGTCGTAGACGATTGCCGAGTCGAAATCATCCTTATGCCT 451359 Query 63866 GTTAACTATATCCATGGTGATACTT-GAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 63924 | || | | ||| || || | ||| || || ||| | || |||| | || | Sbjct 451358 CATGAC-ACACTCATAAGTATCTTTGGCAATCATAGGCGAAGGCTTGTTATTTCTGGGGT 451300 Query 63925 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 63984 | | || | | ||| ||| | || | | | || || || | |||||||| Sbjct 451299 TGATGTAATGGTATAGATCGCTGACAACCGAAGACCACTGCTTCTTAGTCTGCTTGTGTA 451240 Query 63985 GATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATG 64030 | ||||| ||||| || | ||| || || ||||||||||| || || Sbjct 451239 GGTTTGAAACGGCAATACGGGCAGCCAGGATGGCATAATCTGGGTG 451194 Score = 86.0 bits (94), Expect = 8e-12 Identities = 112/155 (72%), Gaps = 0/155 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| || || ||||| ||| ||| ||||||||||| | || || |||||||| Sbjct 758554 AACAGCAGGCAGGCGAAGTCGGTGTGGAGACCCTCGTCGCGGGAGATGAGCTCGTTGGAG 758613 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || | |||||||| || || ||||| || ||||| || ||||| ||||| | || Sbjct 758614 AAGGTCAAGCCGGGCATGAGACCGCGCTTCTTGAGCCAGAAGATGGAGGCGAAGGCACCG 758673 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAAT 33449 |||||||| || || || || || ||||| || Sbjct 758674 CTGAAGAAGATACCCTCGACGGCGGCGAAGGCGAT 758708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622947067623720