Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq11 325 1e-83 >seq11 Length=1431289 Score = 325 bits (360), Expect = 1e-83 Identities = 1163/1784 (65%), Gaps = 48/1784 (3%) Strand=Plus/Plus Query 363400 AAGACGATGGAGAAATCCTACCTATCTCGTA-TCAATGGTGATATTGTTGAACGCCCGCA 363458 ||||| ||||| ||| ||||| |||| ||||||| | |||| || || ||||| Sbjct 451428 AAGACTTTGGAGCGATCATACCT-TCTCAAGCTCAATGGCAAAATTGCCGAGCGGCCGCA 451486 Query 363459 GCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGA 363518 ||| ||| | ||||||||||| | |||||| | || ||||| | ||||| Sbjct 451487 GCACATGATCATGCGTGTTGCCGTCGGTATCTGGGGTGACGACGTTGAAAAGGTCATTGA 451546 Query 363519 AACATATAAGCTTCTAAGTGCT-CGTGTATT-CACGCACGCCACGCCAACAATGTACAAT 363576 ||||| || || | || | | |||| ||| |||||| | || || | | ||| Sbjct 451547 GACATACAATCTCAT--GTCCAGCAAATATTTCACCCACGCCTCCCCCACCCTTTTCAAC 451604 Query 363577 GCTGGAACTCGTAATCCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCC 363636 || || || | | | ||| | || ||||| || ||| || | |||||||| || | Sbjct 451605 GCCGGTACCCCCCAGGCTCAGCTTTCCTCTTGTTTCCTTGTAGACATGAAGGATGACAGC 451664 Query 363637 ATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGA 363696 || |||||||||| |||||| || |||| ||||||| | || ||||||| || || || Sbjct 451665 ATTGAGGGTATCTATGACACCCTCAAGACTTGTGCTATGATCTCCAAGATGGCGGGTGGT 451724 Query 363697 ATTGGTGT-ATCGATCCACAATGTTCGTGC-ACAGAACAGTTACATTCGCGGCACAGGGG 363754 |||||| | | || || || | | || | || | | ||||||| ||| || | Sbjct 451725 ATTGGTCTCAACGTTC-ACCGTATCCGATCTACCGGATC-TTACATTGCCGGTACCAACG 451782 Query 363755 GATACT-CGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 | |||| | || || | || || ||||||||||| || |||| || || || ||||| Sbjct 451783 G-TACTTCTAACGGTATTGTACCTATGCTTCGTGTCTTCAACAACACGGCCAGATACGTT 451841 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 ||||||||||| ||| | || || ||||| || || |||||||| || | Sbjct 451842 GACCAGGGTGGCAACAAGAGACCTGGTGCCTTTGCCATCTACCTCGAGCCGTGGCACTCG 451901 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 ||| |||| ||||| | || ||||| || ||| ||||| |||||| | || || || Sbjct 451902 GATGTTTTCGAGTTCTTGGATCTCCGTAAGAACCACGGAAAGGAGGAAGTTCGCGCTCGC 451961 Query 363934 GATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAG--GCA-GGT 363990 ||||| ||| ||| || ||| || | || | ||| |||||||| || ||| | | ||| Sbjct 451962 GATCTTTTCCTTGCTCTCTGGATTCCCGATCTTTTCATGAAGCGTGTTGAGAAGAACGGT 452021 Query 363991 AAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCCGATGTATGGGGTGAC 364050 ||| ||| | ||| | || || |||| || || || || | || || | || || Sbjct 452022 --GAA-TGGACGCTCATGTGTCCCAACGAGTGCCCTGGCCTCGCTGACGTCTACGGCGAT 452078 Query 364051 GACTATGTTGCTCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACAATTCCC 364110 || | | ||||| ||||| ||||| ||| | ||||| | || ||| | Sbjct 452079 GAGTTCGAGGCTCTGTACGAGAAGTACGAAGCCGAGGGCCGTGGCCGCCAGAAGGTCAAG 452138 Query 364111 GCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCCTATATG 364170 || ||||| || |||| ||||||| | || | |||| |||||| || | || | ||| Sbjct 452139 GCCCAGAAACTTTGGTATGCCATCCTCGAGGCTCAGACTGAGACTGGTAACCCATTCATG 452198 Query 364171 TTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATTCAGCAG 364230 | ||||| ||| |||||||||||| ||||||| || |||| || || |||| |||| Sbjct 452199 CTTTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAACTATTC-GCAG 452257 Query 364231 AGC-AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAA 364289 | ||||| || |||||||||||||| ||| | ||||| || ||| || || || || Sbjct 452258 TTCTAACCTCTGCACCGAGATTATTGAGTACTCGGCTCCTGATGAGGTCGCTGTGTGCAA 452317 Query 364290 CCTTGCGTCGATCGCGCTTCCGGCGTTTGT------AAAAGATGGTACTTTTGACCACCA 364343 ||| || || | || | || ||| ||| || | || | | || ||| Sbjct 452318 CCTGGCTTCCCTTGCCTTACCTTCGTATGTGGACTACAACGCGGGCGCCTACGATTTCCA 452377 Query 364344 GCATCTTTATGACGTAACCTATCATGCTACTTGC--AATCTCGACAAGGTTATCGACAAG 364401 | | | | ||||| | | || | | ||| ||||| ||||| | || || Sbjct 452378 GAAGTTGCACGACGTTGTCCA-GGTGGT-CGTGCGAAATCTGAACAAGATCATTGAGGTC 452435 Query 364402 AATTATTATCCAATTCCTGAAGC-CG----AGCGTTCTAATATGCGTCATCGCCCGATTG 364456 || | || || | ||||| || || ||| || ||||| || || || || | Sbjct 452436 AACCACTACCCCGTACCTGAGGCTCGCAACAGC-----AACATGCGCCACCGTCCCATCG 452490 Query 364457 GTCTTGGTGTACAGGGCCTCGCTGACGTTTTTATGATGCTCAAGAT-GGCATTTGATTCG 364515 | | ||||| || || || || || | ||| | ||| ||| |||| || ||| Sbjct 452491 GATTGGGTGTCCAAGGTCTTGCCGATGCTTTCCTAGCTCTC-CGATACCCATTCGAATCG 452549 Query 364516 CCTGACGCTCGTGTTCTAAATAAGGAGATCTTTGAAACAATGTATTTTGCCGCAATGACT 364575 ||||| ||| | || || || | ||||| || || || || ||||| |||| Sbjct 452550 CCTGAGGCTAAGTTACTTAACAAACAAATCTTCGAGACCATCTACCACGCCGCCTTGACG 452609 Query 364576 GCTTCGTGTGATTTGGCAAA--AACCAAGGGAAAGTACTCTACTTATGAGGGGTCCCCTC 364633 || || || | || || ||| || ||| | | || ||||| ||||| Sbjct 452610 GCGTCCATGGAGCTCGCTAAGGAAC--TCGGTCCCTACGCCAGCTACGAGGGCTCCCCGG 452667 Query 364634 TTTCGCAGGGAAAATTCCAGTTTGATCTATGGAATGTCACGCCATCTGTCCGATGGAACT 364693 | || ||||| | | || | || | ||| |||||| ||| | | | ||| ||| Sbjct 452668 TCTCCCAGGGTATCCTTCAATACGACATGTGGGATGTCAAGCCCACCGATCTCTGGGACT 452727 Query 364694 GGGATACGCTACGTTCCAACGTTAAGAAGCATGGTACTCGCAACTCCCTCGTTACAGCGC 364753 |||||| ||| | | ||| |||| ||| || ||| | | || | Sbjct 452728 GGGATAGTCTAAAGCAGCAGATCAAGCAGCACGGTGTCCGTAACAGTTTGTTGGTCGCCC 452787 Query 364754 CCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTTA 364813 |||||||||| || ||| | || ||| | || ||||| |||||||| || || | | Sbjct 452788 CCATGCCCACAGCCAGCACTTCGCAAATCTTGGGTAACAATGAGTGCTTTGAGCCTTACA 452847 Query 364814 CAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTACC 364873 | ||| | || || || || || || | ||||| || | ||| ||||| | | Sbjct 452848 CCTCCAACATCTACTCGCGTCGTGTCCTCGCGGGAGAGTTCCAGGTTGTTAACCCTTGGC 452907 Query 364874 TAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATCG 364933 || ||||||| ||| |||| || |||||| ||||| |||||||||| || || | Sbjct 452908 TACTCAAGGACCTTGTCGACATGGGTCTGTGGTCTGACAACATGAAGAACCGCATTATTG 452967 Query 364934 CCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTACA 364993 ||| |||||| | |||||||| || | |||| | ||| | ||| | | |||| Sbjct 452968 CCGAAGGTGGTTCGATCCAGAACATCCCCAGCATTCCTGCTGATATCAAGGCATTGTACA 453027 Query 364994 AAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCTT 365053 | || || |||||||| || ||| || | | | ||||| ||||| || ||||| | Sbjct 453028 AGACGGTTTGGGAAATCTCTCAGCGTACCGTTGTCCAGATGGCTGCCGACCGTGGTGCGT 453087 Query 365054 TTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAGCCAACCTCCGCCAAGCTTA 365113 | ||| |||| |||||| ||||| | ||||| | || || | |||| | | Sbjct 453088 TCATCGATCAGTCCCAGTCTCTTAACATTCACATGAGAGAACCCACTATGGGCAAGATCA 453147 Query 365114 CATCCATGCATTTCTACGGG-TGGAAATCCGGTCTTAAGACAGG 365156 | |||||| ||| ||||| ||||| |||||| ||||| || Sbjct 453148 CGAGCATGCACTTC-ACGGGTTGGAAGCTCGGTCTCAAGACGGG 453190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353316113294