Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq6 84.2 2e-11 >seq6 Length=3640113 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || || |||||||| || |||||||||||| || ||| | | ||| Sbjct 611628 AGAACCAAGTGAAGAGTCGACTCCTTCTGGATGTTGTAGTCGCTCAAAGTTCGGCCATCC 611687 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGT-C 16842 ||||| || || || || | ||||| || || ||||| || | ||||| |||| | Sbjct 611688 TCCAACTGCTTACCGGCGAAGATAAGACGTTGCTGGTCAGGCGGGATACCCTCCTTGTCC 611747 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 | | ||||| |||||| | | | | || || | ||| || | |||||||| Sbjct 611748 TGGATCTTGCT-CTTCACGTTGTCAATGGTATCCGAAGATTCCACCTCGAGTGTGATGGT 611806 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||||||| || || |||||||| || ||||| Sbjct 611807 CTTTCCGGTGAGGGTCTTGACAAAGATTTGCAT 611839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087916070830