Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq11 232 8e-56 >seq11 Length=1431289 Score = 232 bits (256), Expect = 8e-56 Identities = 1320/2086 (63%), Gaps = 70/2086 (3%) Strand=Plus/Minus Query 61840 CTTG-TCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTC 61898 |||| |||| ||||| || ||||| || || | || ||||| ||||||||||||| Sbjct 453249 CTTGATCCACGGTGAACTGGATGGGCTGGGCGGCAGCTTGGGTACGGAGATAGTACATTC 453190 Query 61899 CCGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCG 61958 |||| || |||||||| |||| || || ||||| ||||| | ||| | | | Sbjct 453189 CCGTCTTGAGACCGAGCTTCCAACCCGTGAAGTGCATGCTCGTGATCTTGCCCATAGTGG 453130 Query 61959 GATCTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAG 62018 | ||| || || || || | ||| || ||||||||||| || || | ||| |||| Sbjct 453129 GTTCTCTCATGTGAATGTTAAGAGACTGGGACTGATCGATGAACGCACCACGGTCGGCAG 453070 Query 62019 CCATTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATAAACTCGCTTAATAT 62078 |||| | | || || || | |||||||||| || || || | | ||| |||| Sbjct 453069 CCATCTGGACAACGGTACGCTGAGAGATTTCCCAAACCGTCTTGTACAATGCCTTGATAT 453010 Query 62079 CTTCTGGAAGGTTTG---TATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGA 62135 | | |||| | | | | ||||| || || ||||| || || ||||| | ||||| | Sbjct 453009 CAGCAGGAATGCTGGGGATGTTCTGGATCGAACCACCTTCGGCAATAATGCGGTTCTTCA 452950 Query 62136 TCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTT 62195 | | ||| ||| | | ||| | | | || || || ||||| || | Sbjct 452949 TGTTGTCAGACCACAGACCCATGTCGACAAGGTCCTTGAGTAGCCAAGGGTTAACAACCT 452890 Query 62196 GAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACT 62255 | || ||||| | | || | || | ||| || || ||| || || || | ||| Sbjct 452889 GGAACTCTCCCGCGAGGACACGACGCGAGTAGATGTTGGAGGTGTAAGGCTCAAAGCACT 452830 Query 62256 CATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTAT 62315 |||| || ||||| ||||| | ||| || || ||||| || || ||||| ||||| | Sbjct 452829 CATTGTTACCCAAGATTTGCGAAGTGCTGGCTGTGGGCATGGGGGCGACCAACAAACTGT 452770 Query 62316 TTCTAAGACCGT-ATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGAC 62374 | | | ||||| || | |||| | | |||||| ||||| | ||| ||||| | Sbjct 452769 TACGGACACCGTGCTGCT-TGATCTGCTGCTTTAGACTATCCCAGTCCCAGAGATCGGTG 452711 Query 62375 GGTACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTAC----GATCCTAC 62430 || || ||| || ||||| |||| || || || | Sbjct 452710 GGCTTGACATCCCACATGTCGTATTGAAGGATACC----CTGGGAGACCGGGGAGCCCTC 452655 Query 62431 ATATGTATCGTATGGTCC---TTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACC 62487 || | |||| || || |||||| ||| || || |||| || || | Sbjct 452654 GTAGCTGGCGTAGGGACCGAGTTCCTT---AGCGAGCTCCATGGACGCCGTCAAGGCGGC 452598 Query 62488 GTAATAAATGGTTTCGAAGATCTTCTTATTTAG-ATCTTGCGCTTCCAGGCTA-TCAAAT 62545 || || ||||| |||||||| | || || || | ||| || ||||| | || ||| Sbjct 452597 GTGGTAGATGGTCTCGAAGATTTGTTTGTTAAGTAACTTAGCCT--CAGGCGATTCGAAT 452540 Query 62546 GGATAATTTAAGAG-AATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCT 62604 || | || |||| | || || || || | ||||| ||||| | ||||| || | Sbjct 452539 GGGT-ATCGGAGAGCTAGGAAAGCATCGGCAAGACCTTGGACACCCAATCCGATGGGACG 452481 Query 62605 ATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTT 62664 || | | | || | | ||| || || | || || | || | || || || || Sbjct 452480 GTGGCGCATGTTGCTGTTGCGAGCCTCAGGTACGGGGTAGTGGTTGACCTCAATGATCTT 452421 Query 62665 ATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC-AAATCGCC 62723 || ||||||| || | || | ||| || || | || || | ||||| | |||| Sbjct 452420 GTTCAGATTTCGCACGACCACCTGGACAACGTCGTGCAACTTCTGGAAATCGTAGGCGCC 452361 Query 62724 C---ATCTATT--ACAAAC-ATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCT 62777 | | || | ||| || | | | || |||| || ||||| || || || || |||| Sbjct 452360 CGCGTTGTAGTCCACATACGAAGGT-AAGGCAAGGGAAGCCAGGTTGCACACAGCGACCT 452302 Query 62778 CATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTA 62837 ||| || | ||| || | || ||||| ||||| || ||| || || ||||| | Sbjct 452301 CATCAGGAGCCGAGTACTCAATAATCTCGGTGCAGAGGTTAGAACTGCGAATAGTTCCCA 452242 Query 62838 AATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAG 62897 || | || || ||||| ||| || |||||| ||||| |||||||| |||||| Sbjct 452241 GGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAAAGCATGAATGGGTTACCAG 452182 Query 62898 TTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC-GAGCCTTTA--TTATAGATT 62954 | ||| |||||| || | || || | ||| | | || | ||||| | || | | Sbjct 452181 TCTCAGTCTGAGCCTCGAGGATGGCATACCA-AAGTTTCTGGGCCTTGACCTTCTGG--C 452125 Query 62955 TGTATCTCTTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAAC 63012 | | || |||||| | ||| | | | |||||||| || || | || Sbjct 452124 GGCCACGGCCCTCGGCTTCGTACTTCTCGTACAGAGCC--TCGAACTCATCGCCGTAGAC 452067 Query 63013 ATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCAC 63072 | | || ||||| || || | |||||||| | || ||| || |||| | || || Sbjct 452066 GTCAGCGAGGCCAGGGCACTCGTTGGGACACATGAGCGTCCATTCACCGTTCTTCTCAAC 452007 Query 63073 TCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTC 63132 || ||||| || ||||| |||||||| ||||| | || ||||| | | | | ||| Sbjct 452006 ACGCTTCATGAAAAGATCGGGAATCCAGAGAGCAAGGAAAAGATCGCGAGCGCGAACTTC 451947 Query 63133 CTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTC 63192 ||| ||||| ||||| ||||| | |||| | | || ||| || |||||||| || Sbjct 451946 CTCCTTTCCGTGGTTCTTACGGAGATCCAAGAACTCGAAAACATCCGAGTGCCACGGCTC 451887 Query 63193 CAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGT 63252 | ||| ||||| | | ||||| | ||||| || ||||| || | |||||| || || Sbjct 451886 GAGGTAGATGGCAAAGGCACCAGGTCTCTTGTTGCCACCCTGGTCAACGTATCTGGCCGT 451827 Query 63253 GTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGAT 63312 ||| || | || | | ||| || | |||||| || || ||||| ||||| || | || Sbjct 451826 GTTGTTGAAGACACGAAGCATAGGTACAATACCGTTAGAAGTACCGTTGGTACCGGCAAT 451767 Query 63313 ATAGCTTCCACTGGCACGAATATTACTAA--TTGATAGACCTATTCCCCCTGCCATTTTA 63370 || ||| | | || ||| || ||| ||||| || || || ||||| || Sbjct 451766 GTAAGATCCGGTAGATCGGATACGGTGAACGTTG--AGACCAATACCACCCGCCATCTTG 451709 Query 63371 GAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATG 63430 ||||| | || || || | || |||||||| ||||| || || |||||| ||||| Sbjct 451708 GAGATCATAGCACAAGTCTTGAGGGTGTCATAGATACCCTCAATGCTGTCATCCTTCATG 451649 Query 63431 TTAAGTAGAAAACAGCTAGACATTTGGTGACGACT----AGTTCCCGCATTAAATAAGGT 63486 | | || ||||| ||| | ||| | || || || || || || | ||| Sbjct 451648 TCTACAAGGAAACA---AGAGGAAAGCTGA-GCCTGGGGGGTACCGGCGTTGAAAAGGGT 451593 Query 63487 AGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAAT-AGCT---- 63541 || || ||||| || || |||| || | |||||||| |||||||| | || Sbjct 451592 GGGGGAGGCGTGGGTGAAATATTTGCTGGACATGAGATTGTATGTCTCAATGACCTTTTC 451533 Query 63542 -GAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCT 63600 ||| | |||| || || || || |||||||| | ||||||||| || | Sbjct 451532 AACGTCGTCACCCCA------GATACCGACGGCAACACGCATGATCATGTGCTGCGGCCG 451479 Query 63601 TTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAA 63660 || | || ||| || | || | | ||| ||| |||||||| || || ||||| Sbjct 451478 CTCGGCAATTTTGCCATTGAGCTTGAGAAGGTATGATCGCTCCAAAGTCTTGAAGCCAAA 451419 Query 63661 ATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTT 63720 || | ||| |||||||| ||||| | || |||||| || | |||||||| | Sbjct 451418 GTATTGGTAGTTGAAGTCTCGGTCGTAGACGATTGCCGAGTCGAAATCATCCTTATGCCT 451359 Query 63721 GTTAACTACATCCAT-GGTAATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGAT 63779 | || ||| ||| ||| | | ||| ||||| || | || |||| | || | Sbjct 451358 CATGAC-ACACTCATAAGTATCTTTGGCAATCATAGGCGAAGGCTTGTTATTTCTGGGGT 451300 Query 63780 TGACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTA 63839 ||| || | | ||| ||| | || | | | || || || | ||||||| Sbjct 451299 TGATGTAATGGTATAGATCGCTGACAACCGAAGACCACTGCTTCTTAGTCTGCTTGTGTA 451240 Query 63840 GATTTGATACGGCTATTCTAGCGGCTAGAATGGCATAATCCGGATG 63885 | ||||| ||||| || | || || || ||||||||||| || || Sbjct 451239 GGTTTGAAACGGCAATACGGGCAGCCAGGATGGCATAATCTGGGTG 451194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631865353200