Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq6 104 2e-17 >seq6 Length=3640113 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | ||||| || ||||||| | || || ||||| || Sbjct 612602 ATGCAGATTTTCGTTAAGACCCTTACCGGCAAGACCATCACTCTTGAGGTCGAGTCTTCC 612543 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||||||||| | ||| || ||| ||||| ||||| ||||| |||||||| Sbjct 612542 GACACTATCGACAACGTTAAGTCGAAGATCCAGGACAAGGAAGGTATTCCTCCTGACCAG 612483 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | ||||| || || || ||| | || || | ||||||| | ||| ||||| Sbjct 612482 CAGCGATTGATTTTCGCTGGTAAGCAACTCGAGGACGGTCGCACTCTCTCCGACTACAAC 612423 Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || || || || || || || || || || Sbjct 612422 ATCCAGAAGGAGTCTACCCTCCACTTGGTCCT 612391 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| ||||| ||||| | || || |||| || || || || Sbjct 612067 ATGCAGATCTTCGTCAAGACCTTGACGGGTAAGACGATTACTCTCGAGGTCGAATCTTCC 612008 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 || |||||||| | ||| | || | ||| ||||| || || || ||||||||||| Sbjct 612007 GATACTATCGACAACGTCAAGTCGAAGATTCAA-GACAAGGAGGGTATCCCACCTGACCA 611949 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || | || || || || || || || ||||||| || ||| || ||| || || Sbjct 611948 GCAACGTCTCATCTTCGCTGGAAAGCAGTTGGAAGATGGACGAACTTTGTCCGACTATAA 611889 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| ||||||||||| || || || || || Sbjct 611888 CATTCAGAAAGAATCCACCCTTCACTTGGTCCT 611856 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327910219855