Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Endocalyx_20cinctus_20[genbank_20GCA_5F001600455.1_202016-03-01] 17 sequences; 44,773,950 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq1 104 2e-17 >seq1 Length=7732581 Score = 104 bits (114), Expect = 2e-17 Identities = 253/381 (66%), Gaps = 2/381 (1%) Strand=Plus/Minus Query 20372 AACAAGTGACAGGGCGGAAGCGCCATCAACGACAAGTCCGCCGGGTTCCACGCACACATA 20431 |||| |||||| ||||||||||||||| | | || ||||||||||| || | | Sbjct 2738796 AACATGTGACAAGGCGGAAGCGCCATCTTCTTGATATCGGCCGGGTTCCAGGCGCTGAGG 2738737 Query 20432 ATGATTCTTCTATCGTGCGGATTATTTTTTATTAAATCCACAATGTACGACAATTGGTCA 20491 ||||| | || ||||| ||| |||| | | | | | | | || || || Sbjct 2738736 ATGATGCGTCGATCGTACGGGTTATGCCTGAGCTTGTGGATCACCTCGGCCAGCTGATCG 2738677 Query 20492 AACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGCCTCCAC 20551 | ||||| || | || || | | ||||||||||||| | ||||| ||||| | |||| Sbjct 2738676 ACGCCCTGACCCGCGTAATCCGTCTTCGCGTCCACGTACTCGGCCCCGAAGTGTCGCCAC 2738617 Query 20552 TGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGCCCGGCC 20611 ||||| ||||| || || |||| || ||| || | |||| ||| || | | | Sbjct 2738616 TGGAACCCGTACACCGGCCCCAGGTCGCCCACCTCGCGATGCGACAGTCCCACGCTGTCG 2738557 Query 20612 AGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGCTCCCTG 20671 |||||||| | || || || ||||||||||||||| || | || ||| || Sbjct 2738556 AGGAACTCGCGCGACCCGTTCCCGTCCCATATCTTGACCCCGGCCTCCGATAGCGCCAGC 2738497 Query 20672 GAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTAC-GCCTCGCCAAAACAC 20730 || || |||||| || ||||| || ||||| || || |||| | || || Sbjct 2738496 GACGACGTGTTCCCCTCCACGAACCATAGAAGCTCCGCTACGACGGCCTTG-AGGAAGAC 2738438 Query 20731 CCGCTTTGTGGTTAGTAAGGG 20751 |||||| || || ||||| || Sbjct 2738437 CCGCTTCGTCGTCAGTAAAGG 2738417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441372706208280